Role played by the environment in the emergence and spread of antimicrobial resistance (AMR) through the food chain

EFSA Panel on Biological Hazards (BIOHAZ)… - Efsa …, 2021 - Wiley Online Library
The role of food‐producing environments in the emergence and spread of antimicrobial
resistance (AMR) in EU plant‐based food production, terrestrial animals (poultry, cattle and …

Effects of micro-aeration on microbial niches and antimicrobial resistances in blackwater anaerobic digesters

B Guo, N Yu, DG Weissbrodt, Y Liu - Water research, 2021 - Elsevier
Anaerobic digestion (AD) of source-diverted blackwater (toilet flush) at ambient room
temperature presents challenges for fast hydrolysis of particulate matters. This study …

Application of genomics and metagenomics to improve food safety based on an enhanced characterisation of antimicrobial resistance

V Pennone, JF Cobo-Díaz, M Prieto… - Current Opinion in Food …, 2022 - Elsevier
Recent advances on genomics and metagenomics, due to the availability of affordable
sequencing technologies and to software developments, have paved the way for the rapid …

Hidden resistome: enrichment reveals the presence of clinically relevant antibiotic resistance determinants in treated wastewater-irrigated soils

RBM Marano, CL Gupta, T Cozer… - Environmental …, 2021 - ACS Publications
Treated-wastewater (TW) irrigation transfers antibiotic-resistant bacteria (ARB) to soil, but
persistence of these bacteria is generally low due to resilience of the soil microbiome …

Trace contaminants in the environmental assessment of organic waste recycling in agriculture: Gaps between methods and knowledge

A Avadí, P Benoit, MN Bravin, B Cournoyer… - Advances in …, 2022 - Elsevier
Agricultural recycling of organic waste (OW) derived from urban, agricultural and
agroindustrial sources is an essential sustainable development strategy. Yet repeated …

Metagenomic exploration of antibiotic resistome in treated wastewater effluents and their receiving water

S Raza, H Jo, J Kim, H Shin, HG Hur, T Unno - Science of the Total …, 2021 - Elsevier
Environmental dissemination of antimicrobial resistance is a global health problem.
Antimicrobial-resistant bacteria and antibiotic-resistant genes (ARGs) are constantly …

Antibiotics and fecal transfaunation differentially affect microbiota recovery, associations, and antibiotic resistance in lemur guts

SL Bornbusch, RL Harris, NM Grebe, K Roche… - Animal Microbiome, 2021 - Springer
Background Antibiotics alter the diversity, structure, and dynamics of host-associated
microbial consortia, including via development of antibiotic resistance; however, patterns of …

Effects of different oxygen conditions on pollutants removal and the abundances of tetracycline resistance genes in activated sludge systems

Z Fan, S Yang, Q Zhu, X Zhu - Chemosphere, 2022 - Elsevier
The individual and combined effects of tetracycline (TC) and divalent copper (Cu 2+) on the
performance of activated sludge systems and the abundances of tetracycline resistance …

A rapid approach with machine learning for quantifying the relative burden of antimicrobial resistance in natural aquatic environments

P Jiang, S Sun, SG Goh, X Tong, Y Chen, K Yu, Y He… - Water Research, 2024 - Elsevier
The massive use and discharge of antibiotics have led to increasing concerns about
antimicrobial resistance (AMR) in natural aquatic environments. Since the dose-response …

Underrepresented high diversity of class 1 integrons in the environment uncovered by PacBio sequencing using a new primer

Y Yang, AN Zhang, Y Che, L Liu, Y Deng… - Science of the Total …, 2021 - Elsevier
Abstract Class 1 integrons (CL1s) are one of the major contributors to the horizontal transfer
of antibiotic resistance genes (ARGs). However, our knowledge of CL1 in the environment is …