Folding funnels and binding mechanisms

B Ma, S Kumar, CJ Tsai, R Nussinov - Protein engineering, 1999 - academic.oup.com
The long-held views on lock-and-key versus induced fit in binding arose from the notion that
a protein exists in a single, most stable conformation, dictated by its sequence. However, in …

Protein− protein interactions: interface structure, binding thermodynamics, and mutational analysis

WE Stites - Chemical reviews, 1997 - ACS Publications
It is difficult to overstate the importance of proteinprotein interactions in biological processes.
Some of these interactions and their roles are well known, for instance, the formation of …

Standard conformations for the canonical structures of immunoglobulins

B Al-Lazikani, AM Lesk, C Chothia - Journal of molecular biology, 1997 - Elsevier
A comparative analysis of the main-chain conformation of the L1, L2, L3, H1 and H2
hypervariable regions in 17 immunoglobulin structures that have been accurately …

[图书][B] Laboratory techniques in biochemistry and molecular biology

TR Flotte, KI Berns - 1969 - books.google.com
Adeno-associated viruses (AAV) are ubiquitous in the human population (> 90% of adults
are seropositive) but have never been implicated as the cause of any disease. They were …

TCR binding to peptide-MHC stabilizes a flexible recognition interface

BE Willcox, GF Gao, JR Wyer, JE Ladbury, JI Bell… - Immunity, 1999 - cell.com
The binding of TCRs to their peptide-MHC ligands is characterized by a low affinity, slow
kinetics, and a high degree of cross-reactivity. Here, we report the results of a kinetic and …

Molecular recognition in antibody-antigen complexes

EJ Sundberg, RA Mariuzza - Advances in protein chemistry, 2002 - Elsevier
With the numerous detailed molecular descriptions of antibody-antigen interfaces, the
structural study of these molecular interactions has evolved from an attempt to understand …

Maturation of an antibody response is governed by modulations in flexibility of the antigen-combining site

V Manivel, NC Sahoo, DM Salunke, KVS Rao - Immunity, 2000 - cell.com
Although affinity maturation constitutes an integral part of T-dependent humoral responses,
its structural basis is less well understood. We compared the physicochemical properties of …

Camel single‐domain antibody inhibits enzyme by mimicking carbohydrate substrate

TR Transue, E De Genst, MA Ghahroudi… - Proteins: Structure …, 1998 - Wiley Online Library
Whereas antibodies have demonstrated the ability to mimic various compounds, classic
heavy/light‐chain antibodies may be limited in their applications. First, they tend not to bind …

Probing a protein–protein interaction by in vitro evolution

G Thom, AC Cockroft, AG Buchanan… - Proceedings of the …, 2006 - National Acad Sciences
In this study, we used in vitro protein evolution with ribosome and phage display to optimize
the affinity of a human IL-13-neutralizing antibody, a therapeutic candidate for the treatment …

Association and dissociation kinetics of anti-hen egg lysozyme monoclonal antibodies HyHEL-5 and HyHEL-10

KA Xavier, RC Willson - Biophysical journal, 1998 - cell.com
Abstract The immunoglobulin G1 (IgG 1) κ antibodies HyHEL-5 and HyHEL-10 interact with
nonoverlapping epitopes on hen egg lysozyme (HEL); the HyHEL-5/HEL interface has two …