Drivers of microbiome biodiversity: a review of general rules, feces, and ignorance

AT Reese, RR Dunn - MBio, 2018 - Am Soc Microbiol
The alpha diversity of ecologic communities is affected by many biotic and abiotic drivers
and, in turn, affects ecosystem functioning. Yet, patterns of alpha diversity in host-associated …

Molecular mechanisms of adaptive evolution in wild animals and plants

Y Hu, X Wang, Y Xu, H Yang, Z Tong, R Tian… - Science China Life …, 2023 - Springer
Wild animals and plants have developed a variety of adaptive traits driven by adaptive
evolution, an important strategy for species survival and persistence. Uncovering the …

Applying the core microbiome to understand host–microbe systems

A Risely - Journal of Animal Ecology, 2020 - Wiley Online Library
The host‐associated core microbiome was originally coined to refer to common groups of
microbes or genes that were likely to be particularly important for host biological function …

The unique gut microbiome of giant pandas involved in protein metabolism contributes to the host's dietary adaption to bamboo

F Deng, C Wang, D Li, Y Peng, L Deng, Y Zhao… - Microbiome, 2023 - Springer
Background The gut microbiota of the giant panda (Ailuropoda melanoleuca), a global
symbol of conservation, are believed to be involved in the host's dietary switch to a fibrous …

[HTML][HTML] Seasonal shift of the gut microbiome synchronizes host peripheral circadian rhythm for physiological adaptation to a low-fat diet in the giant panda

G Huang, L Wang, J Li, R Hou, M Wang, Z Wang, Q Qu… - Cell Reports, 2022 - cell.com
Characteristics of the gut microbiome vary synchronously with changes in host diet.
However, the underlying effects of these fluctuations remain unclear. Here, we performed …

Marked seasonal variation in structure and function of gut microbiota in forest and alpine musk deer

F Jiang, H Gao, W Qin, P Song, H Wang… - Frontiers in …, 2021 - frontiersin.org
Musk deer (Moschus spp.) is a globally endangered species due to excessive hunting and
habitat fragmentation. Captive breeding of musk deer can efficiently relieve the hunting …

The potential role of the gut microbiota in shaping host energetics and metabolic rate

EC Lindsay, NB Metcalfe… - Journal of Animal …, 2020 - Wiley Online Library
It is increasingly recognized that symbiotic microbiota (especially those present in the gut)
have important influences on the functioning of their host. Here, we review the interplay …

Conservation metagenomics: a new branch of conservation biology

F Wei, Q Wu, Y Hu, G Huang, Y Nie, L Yan - Science China Life Sciences, 2019 - Springer
Multifaceted approaches are required to monitor wildlife populations and improve
conservation efforts. In the last decade, increasing evidence suggests that metagenomic …

PandaGUT provides new insights into bacterial diversity, function, and resistome landscapes with implications for conservation

G Huang, W Shi, L Wang, Q Qu, Z Zuo, J Wang, F Zhao… - Microbiome, 2023 - Springer
Background The gut microbiota play important roles in host adaptation and evolution, but
are understudied in natural population of wild mammals. To address host adaptive evolution …

Diet drives convergent evolution of gut microbiomes in bamboo-eating species

G Huang, X Wang, Y Hu, Q Wu, Y Nie, J Dong… - Science China Life …, 2021 - Springer
Gut microbiota plays a critical role in host physiology and health. The coevolution between
the host and its gut microbes facilitates animal adaptation to its specific ecological niche …