In silico methods for identification of potential therapeutic targets

X Zhang, F Wu, N Yang, X Zhan, J Liao, S Mai… - Interdisciplinary …, 2022 - Springer
At the initial stage of drug discovery, identifying novel targets with maximal efficacy and
minimal side effects can improve the success rate and portfolio value of drug discovery …

The development of precision medicine in clinical practice

M He, J Xia, M Shehab, X Wang - Clinical and translational medicine, 2015 - Springer
Precision medicine allows a dramatic expansion of biological data, while there is still an
urgent need to understand and insight the exact meaning of those data to human health and …

Transferring knowledge of bacterial protein interaction networks to predict pathogen targeted human genes and immune signaling pathways: a case study on M …

S Mei, EK Flemington, K Zhang - BMC genomics, 2018 - Springer
Background Bacterial invasive infection and host immune response is fundamental to the
understanding of pathogen pathogenesis and the discovery of effective therapeutic drugs …

[HTML][HTML] Integrative network and transcriptomics-based approach predicts genotype-specific drug combinations for melanoma

KE Regan, PRO Payne, F Li - AMIA Summits on Translational …, 2017 - ncbi.nlm.nih.gov
Computational methods for drug combination predictions are needed to identify effective
therapies that improve durability and prevent drug resistance in an efficient manner. In this …

Network analysis reveals common host protein/s modulating pathogenesis of neurotropic viruses

S Ghosh, S Mukherjee, N Sengupta, A Roy, D Dey… - Scientific Reports, 2016 - nature.com
Network analysis through graph theory provides a quantitative approach to characterize
specific proteins and their constituent assemblies that underlie host-pathogen interactions …

A maximum flow-based approach to prioritize drugs for drug repurposing of chronic diseases

MM Islam, Y Wang, P Hu - Life, 2021 - mdpi.com
The discovery of new drugs is required in the time of global aging and increasing
populations. Traditional drug development strategies are expensive, time-consuming, and …

Bis-spirochromanones as potent inhibitors of Mycobacterium tuberculosis: synthesis and biological evaluation

A Dongamanti, VK Aamate, MG Devulapally… - Molecular Diversity, 2017 - Springer
On the basis of reported antimycobacterial property of chroman-4-one pharmacophore, a
series of chemically modified bis-spirochromanones were synthesized starting from 2 …

In Silico Enhancing M. tuberculosis Protein Interaction Networks in STRING To Predict Drug-Resistance Pathways and Pharmacological Risks

S Mei - Journal of proteome research, 2018 - ACS Publications
Bacterial protein–protein interaction (PPI) networks are significant to reveal the machinery of
signal transduction and drug resistance within bacterial cells. The database STRING has …

Decentralized control of flow in complex networks

S Al-Takrouri, M Al-Maghalseh - Procedia Computer Science, 2024 - Elsevier
A decentralized control algorithm for routing flow in complex networks is proposed. The aim
is to fairly distribute the supply/demand among the nodes while maintaining maximum flow …

Drug repurposing by simulating flow through protein–protein interaction networks

M Manczinger, VÁ Bodnár, BT Papp… - Clinical …, 2018 - Wiley Online Library
As drug development is extremely expensive, the identification of novel indications for in‐
market drugs is financially attractive. Multiple algorithms are used to support such drug …