Genome-wide analyses of alternative splicing in plants: opportunities and challenges

WB Barbazuk, Y Fu, KM McGinnis - Genome research, 2008 - genome.cshlp.org
Alternative splicing (AS) creates multiple mRNA transcripts from a single gene. While AS is
known to contribute to gene regulation and proteome diversity in animals, the study of its …

[HTML][HTML] Oncogenic SRSF3 in health and diseases

R Jia, ZM Zheng - International Journal of Biological Sciences, 2023 - ncbi.nlm.nih.gov
Serine/arginine rich splicing factor 3 (SRSF3) is an important multi-functional splicing factor,
and has attracted increasing attentions in the past thirty years. The importance of SRSF3 is …

PTEN antagonises Tcl1/hnRNPK-mediated G6PD pre-mRNA splicing which contributes to hepatocarcinogenesis

X Hong, R Song, H Song, T Zheng, J Wang, Y Liang… - Gut, 2014 - gut.bmj.com
Background Mounting epidemiological evidence supports a role for phosphatase and tensin
homologue (PTEN)-T cell leukaemia 1 (Tcl1) signalling deregulation in …

LINC01615 maintains cell survival in adaptation to nutrient starvation through the pentose phosphate pathway and modulates chemosensitivity in colorectal cancer

Y Zhang, L Xu, Z Ren, X Liu, J Song, P Zhang… - Cellular and Molecular …, 2023 - Springer
Numerous mechanisms involved in promoting cancer cell survival under nutrient starvation
have been described. Long noncoding RNAs (lncRNAs) have emerged as critical players in …

Mechanistic control of carcinoembryonic antigen-related cell adhesion molecule-1 (CEACAM1) splice isoforms by the heterogeneous nuclear ribonuclear proteins …

KJ Dery, S Gaur, M Gencheva, Y Yen, JE Shively… - Journal of Biological …, 2011 - ASBMB
Carcinoembryonic antigen-related cell adhesion molecule-1 (CEACAM1) is expressed in a
variety of cell types and is implicated in carcinogenesis. Alternative splicing of CEACAM1 …

3-BrPA eliminates human bladder cancer cells with highly oncogenic signatures via engagement of specific death programs and perturbation of multiple signaling and …

EG Konstantakou, GE Voutsinas, AD Velentzas… - Molecular cancer, 2015 - Springer
Background Urinary bladder cancer is one of the most fatal and expensive diseases of
industrialized world. Despite the strenuous efforts, no seminal advances have been …

Glucose-6-phosphate dehydrogenase–beyond the realm of red cell biology

HY Ho, ML Cheng, DTY Chiu - Free Radical Research, 2014 - Taylor & Francis
Abstract Glucose-6-phosphate dehydrogenase (G6PD) is critical to the maintenance of
NADPH pool and redox homeostasis. Conventionally, G6PD deficiency has been …

Serine arginine splicing factor 3 is involved in enhanced splicing of glucose-6-phosphate dehydrogenase RNA in response to nutrients and hormones in liver

CM Walsh, AL Suchanek, TJ Cyphert, AB Kohan… - Journal of Biological …, 2013 - ASBMB
Expression of G6PD is controlled by changes in the degree of splicing of the G6PD mRNA in
response to nutrients in the diet. This regulation involves an exonic splicing enhancer (ESE) …

[HTML][HTML] Role of precursor mRNA splicing in nutrient-induced alterations in gene expression and metabolism

S Ravi, RJ Schilder, SR Kimball - The Journal of nutrition, 2015 - Elsevier
Precursor mRNA (pre-mRNA) splicing is a critical step in gene expression that results in the
removal of intronic sequences from immature mRNA, leading to the production of mature …

lhCLIP reveals the in vivo RNA–RNA interactions recognized by hnRNPK

Y Hu, T Hao, H Yu, W Miao, Y Zheng, W Tao… - Plos …, 2023 - journals.plos.org
RNA-RNA interactions play a crucial role in regulating gene expression and various
biological processes, but identifying these interactions on a transcriptomic scale remains a …