Modeling the within-host dynamics of HIV infection

AS Perelson, RM Ribeiro - BMC biology, 2013 - Springer
The new field of viral dynamics, based on within-host modeling of viral infections, began with
models of human immunodeficiency virus (HIV), but now includes many viral infections …

Virulence and pathogenesis of HIV-1 infection: an evolutionary perspective

C Fraser, K Lythgoe, GE Leventhal, G Shirreff… - Science, 2014 - science.org
Background Why some individuals develop AIDS rapidly whereas others remain healthy
without treatment for many years remains a central question of HIV research. Of the …

CCL3L1 and CCR5 influence cell-mediated immunity and affect HIV-AIDS pathogenesis via viral entry-independent mechanisms

MJ Dolan, H Kulkarni, JF Camargo, W He, A Smith… - Nature …, 2007 - nature.com
Although host defense against human immunodeficiency virus 1 (HIV-1) relies mainly on cell-
mediated immunity (CMI), the determinants of CMI in humans are poorly understood. Here …

Phylogenetic approach reveals that virus genotype largely determines HIV set-point viral load

S Alizon, V Von Wyl, T Stadler, RD Kouyos… - PLoS …, 2010 - journals.plos.org
HIV virulence, ie the time of progression to AIDS, varies greatly among patients. As for other
rapidly evolving pathogens of humans, it is difficult to know if this variance is controlled by …

Dynamics of immune escape during HIV/SIV infection

CL Althaus, RJ De Boer - PLoS computational biology, 2008 - journals.plos.org
Several studies have shown that cytotoxic T lymphocytes (CTLs) play an important role in
controlling HIV/SIV infection. Notably, the observation of escape mutants suggests a …

In vivo fitness cost of the M184V mutation in multidrug-resistant human immunodeficiency virus type 1 in the absence of lamivudine

R Paredes, M Sagar, VC Marconi, R Hoh… - Journal of …, 2009 - Am Soc Microbiol
Lamivudine therapy selects for the M184V mutation. Although this mutation reduces the
replicative capacity of human immunodeficiency virus in vitro, its impact on viral fitness in …

Estimating hepatitis B virus cccDNA persistence in chronic infection

KA Lythgoe, SF Lumley, L Pellis, JA McKeating… - Virus …, 2021 - academic.oup.com
Hepatitis B virus (HBV) infection is a major global health problem with over 240 million
infected individuals at risk of developing progressive liver disease and hepatocellular …

Viral dynamics in transplant patients: implications for disease

GA Funk, R Gosert, HH Hirsch - The Lancet infectious diseases, 2007 - thelancet.com
Viral infections cause substantial morbidity and mortality in transplant patients. Quantifying
viral loads is widely appreciated as a direct means to diagnose and monitor the course of …

Understanding the Failure of CD8+ T-Cell Vaccination against Simian/Human Immunodeficiency Virus

RJ De Boer - Journal of virology, 2007 - Am Soc Microbiol
Although CD8+ T cells play an important role in controlling viral infections, boosting specific
CD8+ T cells by prophylactic vaccination with simian immunodeficiency virus (SIV) epitopes …

Implications of CTL-mediated killing of HIV-infected cells during the non-productive stage of infection

CL Althaus, RJ De Boer - PLoS One, 2011 - journals.plos.org
Patients infected with HIV exhibit orders of magnitude differences in their set-point levels of
the plasma viral load. As to what extent this variation is due to differences in the efficacy of …