Processing large data sets has become an essential part of computational genomics.
Greatly increased availability of sequence data from multiple sources has fueled …

Cultivated strawberry (Fragaria× ananassa), a perennial herb belonging to the family
Rosaceae, is a complex octoploid with high heterozygosity at most loci. However, there is no …

Some scientific studies involve huge amounts of bioinformatics data that cannot be analyzed
on personal computers usually employed by researchers for day-to-day activities but rather …

Minimizers are ubiquitously used in data structures and algorithms for efficient searching,
mapping, and indexing of high-throughput DNA sequencing data. Minimizer schemes select …

Advances in high-throughput and digital technologies have required the adoption of big data
for handling complex tasks in life sciences. However, the drift to big data led researchers to …

Motivation We face an increasing flood of genetic sequence data, from diverse sources,
requiring rapid computational analysis. Rapid analysis can be achieved by sampling a …

Motivation Minimizers are efficient methods to sample k-mers from genomic sequences that
unconditionally preserve sufficiently long matches between sequences. Well-established …

True morels (Morchella) are globally renowned medicinal and edible mushrooms. White
mold disease caused by fungi is the main disease of Morchella, which has the …

Data are naturally collected in their raw state and must undergo a series of preprocessing
steps to obtain data in their input state for Artificial Intelligence (AI) and other applications …

The minimizers sampling mechanism is a popular mechanism for string sampling. However,
minimizers sampling mechanisms lack good guarantees on the expected size of their …