Mass spectrometry of nucleic acid noncovalent complexes

E Largy, A Konig, A Ghosh, D Ghosh… - Chemical …, 2021 - ACS Publications
Nucleic acids have been among the first targets for antitumor drugs and antibiotics. With the
unveiling of new biological roles in regulation of gene expression, specific DNA and RNA …

[HTML][HTML] XL-MS: Protein cross-linking coupled with mass spectrometry

AN Holding - Methods, 2015 - Elsevier
With the continuing trend to study larger and more complex systems, the application of
protein cross-linking coupled with mass spectrometry (XL-MS) provides a varied toolkit …

Protein structure and dynamics studied by mass spectrometry: H/D exchange, hydroxyl radical labeling, and related approaches

L Konermann, X Tong, Y Pan - Journal of Mass Spectrometry, 2008 - Wiley Online Library
Mass spectrometry (MS) plays a central role in studies on protein structure and dynamics.
This review highlights some of the recent developments in this area, with focus on …

Chemical RNA cross-linking: mechanisms, computational analysis, and biological applications

WA Velema, Z Lu - Jacs Au, 2023 - ACS Publications
In recent years, RNA has emerged as a multifaceted biomolecule that is involved in virtually
every function of the cell and is critical for human health. This has led to a substantial …

[图书][B] Chemistry of protein and nucleic acid cross-linking and conjugation

SS Wong, DM Jameson, SS Wong - 2012 - api.taylorfrancis.com
It has been 20 years since the publication of Chemistry of Protein Conjugation and Cross-
Linking. During this period, great advances have been made in the area of cross-linking of …

Computational modeling of RNA 3D structure based on experimental data

A Ponce-Salvatierra, Astha, K Merdas… - Bioscience …, 2019 - portlandpress.com
RNA molecules are master regulators of cells. They are involved in a variety of molecular
processes: they transmit genetic information, sense cellular signals and communicate …

Advances in nucleic acid sample preparation for electrospray ionization and matrix-assisted laser desorption ionization mass spectrometry

MD Sharin, GM Floro, KD Clark - International Journal of Mass …, 2023 - Elsevier
Electrospray ionization (ESI) and matrix-assisted laser desorption ionization (MALDI) have
revolutionized the field of nucleic acid analysis. These soft ionization techniques facilitate …

Infrared multiple photon dissociation action spectroscopy of deprotonated DNA mononucleotides: gas-phase conformations and energetics

Y Nei, N Hallowita, JD Steill, J Oomens… - The Journal of …, 2013 - ACS Publications
The gas phase structures of the deprotonated 2′-deoxymononucleotides including 2′-
deoxyadenosine-5′-monophosphate (dA5′ p), 2′-deoxycytidine-5′-monophosphate …

Computational modeling of RNA 3D structures, with the aid of experimental restraints

M Magnus, D Matelska, G Łach, G Chojnowski… - RNA biology, 2014 - Taylor & Francis
In addition to mRNAs whose primary function is transmission of genetic information from
DNA to proteins, numerous other classes of RNA molecules exist, which are involved in a …

Characterization of oligodeoxynucleotides and modifications by 193 nm photodissociation and electron photodetachment dissociation

SI Smith, JS Brodbelt - Analytical chemistry, 2010 - ACS Publications
Ultraviolet photodissociation (UVPD) at 193 nm is compared to collision induced
dissociation (CID) for sequencing and determination of modifications of multideprotonated …