Mass spectrometry-based protein footprinting for higher-order structure analysis: fundamentals and applications

XR Liu, MM Zhang, ML Gross - Chemical reviews, 2020 - ACS Publications
Proteins adopt different higher-order structures (HOS) to enable their unique biological
functions. Understanding the complexities of protein higher-order structures and dynamics …

Chromatographic, electrophoretic, and mass spectrometric methods for the analytical characterization of protein biopharmaceuticals

S Fekete, D Guillarme, P Sandra, K Sandra - Analytical Chemistry, 2016 - ACS Publications
Protein biopharmaceuticals are macromolecules with a therapeutic effect, commonly
produced by the recombinant DNA technology. They have emerged as important …

GABARAP sequesters the FLCN-FNIP tumor suppressor complex to couple autophagy with lysosomal biogenesis

JM Goodwin, WG Walkup IV, K Hooper, T Li… - Science …, 2021 - science.org
Adaptive changes in lysosomal capacity are driven by the transcription factors TFEB and
TFE3 in response to increased autophagic flux and endolysosomal stress, yet the molecular …

Fast fluoroalkylation of proteins uncovers the structure and dynamics of biological macromolecules

L Fojtík, J Fiala, P Pompach, J Chmelík… - Journal of the …, 2021 - ACS Publications
Covalent labeling of proteins in combination with mass spectrometry has been established
as a complementary technique to classical structural methods, such as X-ray, NMR, or …

Microfluidics-assisted conjugation of chitosan-coated polymeric nanoparticles with antibodies: Significance in drug release, uptake, and cytotoxicity in breast cancer …

N Escareño, N Hassan, MJ Kogan, J Juárez… - Journal of Colloid and …, 2021 - Elsevier
Nanoparticle-based drug delivery systems, in combination with high-affinity disease-specific
targeting ligands, provide a sophisticated landscape in cancer theranostics. Due to their …

Recent advancements, challenges, and practical considerations in the mass spectrometry-based analytics of protein biotherapeutics: A viewpoint from the biosimilar …

V Háda, A Bagdi, Z Bihari, SB Timári, Á Fizil… - … of pharmaceutical and …, 2018 - Elsevier
The extensive analytical characterization of protein biotherapeutics, especially of
biosimilars, is a critical part of the product development and registration. High-resolution …

High-resolution hydroxyl radical protein footprinting: Biophysics tool for drug discovery

J Kiselar, MR Chance - Annual review of biophysics, 2018 - annualreviews.org
Hydroxyl radical footprinting (HRF) of proteins with mass spectrometry (MS) is a widespread
approach for assessing protein structure. Hydroxyl radicals react with a wide variety of …

Using covalent labeling and mass spectrometry to study protein binding sites of amyloid inhibiting molecules

T Liu, TM Marcinko, PA Kiefer, RW Vachet - Analytical chemistry, 2017 - ACS Publications
Amyloid aggregates are associated with several debilitating diseases, and there are
numerous efforts to develop small molecule treatments against these diseases. One …

Protein footprinting comes of age: mass spectrometry for biophysical structure assessment

L Wang, MR Chance - Molecular & Cellular Proteomics, 2017 - ASBMB
Protein footprinting mediated by mass spectrometry has evolved over the last 30 years from
proof of concept to commonplace biophysics tool, with unique capabilities for assessing …

Orthogonal mass spectrometry-based footprinting for epitope mapping and structural characterization: the IL-6 receptor upon binding of protein therapeutics

KS Li, G Chen, J Mo, RYC Huang… - Analytical …, 2017 - ACS Publications
Higher-order structure (HOS) is a crucial determinant for the biological functions and quality
attributes of protein therapeutics. Mass spectrometry (MS)-based protein footprinting …