DNA–protein crosslinks and their resolution

P Weickert, J Stingele - Annual Review of Biochemistry, 2022 - annualreviews.org
Covalent DNA–protein crosslinks (DPCs) are pervasive DNA lesions that interfere with
essential chromatin processes such as transcription or replication. This review strives to …

Cell cycle transcription control: DREAM/MuvB and RB-E2F complexes

M Fischer, GA Müller - Critical reviews in biochemistry and …, 2017 - Taylor & Francis
The precise timing of cell cycle gene expression is critical for the control of cell proliferation;
de-regulation of this timing promotes the formation of cancer and leads to defects during …

Nascent chromatin capture proteomics determines chromatin dynamics during DNA replication and identifies unknown fork components

C Alabert, JC Bukowski-Wills, SB Lee… - Nature cell …, 2014 - nature.com
To maintain genome function and stability, DNA sequence and its organization into
chromatin must be duplicated during cell division. Understanding how entire chromosomes …

A cornucopia of human polyomaviruses

JA DeCaprio, RL Garcea - Nature reviews Microbiology, 2013 - nature.com
During the past 6 years, focused virus hunting has led to the discovery of nine new human
polyomaviruses, including Merkel cell polyomavirus, which has been linked to Merkel cell …

Human FAM111A inhibits vaccinia virus replication by degrading viral protein I3 and is antagonized by poxvirus host range factor SPI-1

J Zhu, X Gao, Y Li, Z Zhang, S Xie… - Proceedings of the …, 2023 - National Acad Sciences
Zoonotic poxviruses such as mpox virus (MPXV) continue to threaten public health safety
since the eradication of smallpox. Vaccinia virus (VACV), the prototypic poxvirus used as the …

Genetic causes of hypomagnesemia, a clinical overview

DHHM Viering, JHF de Baaij, SB Walsh, R Kleta… - Pediatric …, 2017 - Springer
Magnesium is essential to the proper functioning of numerous cellular processes.
Magnesium ion (Mg 2+) deficits, as reflected in hypomagnesemia, can cause neuromuscular …

DNA–protein crosslink proteases in genome stability

A Ruggiano, K Ramadan - Communications Biology, 2021 - nature.com
Proteins covalently attached to DNA, also known as DNA–protein crosslinks (DPCs), are
common and bulky DNA lesions that interfere with DNA replication, repair, transcription and …

FAM111A protects replication forks from protein obstacles via its trypsin-like domain

Y Kojima, Y Machida, S Palani, TR Caulfield… - Nature …, 2020 - nature.com
Persistent protein obstacles on genomic DNA, such as DNA-protein crosslinks (DPCs) and
tight nucleoprotein complexes, can block replication forks. DPCs can be removed by the …

Nuclear interferon-inducible protein 16 promotes silencing of herpesviral and transfected DNA

MH Orzalli, SE Conwell, C Berrios… - Proceedings of the …, 2013 - National Acad Sciences
Mammalian cells have evolved mechanisms to silence foreign DNA introduced by viruses or
by transfection. Upon herpesviral infection of cells, the viral genome is chromatinized in an …

Edgotype: a fundamental link between genotype and phenotype

N Sahni, S Yi, Q Zhong, N Jailkhani… - Current opinion in …, 2013 - Elsevier
Classical 'one-gene/one-disease'models cannot fully reconcile with the increasingly
appreciated prevalence of complicated genotype-to-phenotype associations in human …