Translesion DNA polymerases in eukaryotes: what makes them tick?

A Vaisman, R Woodgate - Critical reviews in biochemistry and …, 2017 - Taylor & Francis
Life as we know it, simply would not exist without DNA replication. All living organisms utilize
a complex machinery to duplicate their genomes and the central role in this machinery …

Excessive reactive oxygen species and exotic DNA lesions as an exploitable liability

SF AbdulSalam, FS Thowfeik, EJ Merino - Biochemistry, 2016 - ACS Publications
Although the terms “excessive reactive oxygen species (ROS)” and “oxidative stress” are
widely used, the implications of oxidative stress are often misunderstood. ROS are not a …

Capture of a third Mg2+ is essential for catalyzing DNA synthesis

Y Gao, W Yang - Science, 2016 - science.org
It is generally assumed that an enzyme-substrate (ES) complex contains all components
necessary for catalysis and that conversion to products occurs by rearrangement of atoms …

Human DNA polymerase η has reverse transcriptase activity in cellular environments

Y Su, PP Ghodke, M Egli, L Li, Y Wang… - Journal of Biological …, 2019 - ASBMB
Classical DNA and RNA polymerase (pol) enzymes have defined roles with their respective
substrates, but several pols have been found to have multiple functions. We reported …

A self-activated mechanism for nucleic acid polymerization catalyzed by DNA/RNA polymerases

V Genna, P Vidossich, E Ippoliti, P Carloni… - Journal of the …, 2016 - ACS Publications
The enzymatic polymerization of DNA and RNA is the basis for genetic inheritance for all
living organisms. It is catalyzed by the DNA/RNA polymerase (Pol) superfamily. Here …

A new paradigm of DNA synthesis: three-metal-ion catalysis

W Yang, PJ Weng, Y Gao - Cell & bioscience, 2016 - Springer
Enzyme catalysis has been studied for over a century. How it actually occurs has not been
visualized until recently. By combining in crystallo reaction and X-ray diffraction analysis of …

[HTML][HTML] Current state of knowledge of human DNA polymerase eta protein structure and disease-causing mutations

BC Feltes, CFM Menck - Mutation Research/Reviews in Mutation Research, 2022 - Elsevier
POLη, encoded by the POLH gene, is a crucial protein for replicating damaged DNA and the
most studied specialized translesion synthesis polymerases. Mutations in POLη are …

Human DNA polymerase η accommodates RNA for strand extension

Y Su, M Egli, FP Guengerich - Journal of Biological Chemistry, 2017 - ASBMB
Ribonucleotides are the natural analogs of deoxyribonucleotides, which can be misinserted
by DNA polymerases, leading to the most abundant DNA lesions in genomes. During …

Cooperative motion of a key positively charged residue and metal ions for DNA replication catalyzed by human DNA Polymerase-η

V Genna, R Gaspari, M Dal Peraro… - Nucleic acids …, 2016 - academic.oup.com
Trans-lesion synthesis polymerases, like DNA Polymerase-η (Pol-η), are essential for cell
survival. Pol-η bypasses ultraviolet-induced DNA damages via a two-metal-ion mechanism …

Mechanism of ribonucleotide incorporation by human DNA polymerase η

Y Su, M Egli, FP Guengerich - Journal of Biological Chemistry, 2016 - ASBMB
Ribonucleotides and 2′-deoxyribonucleotides are the basic units for RNA and DNA,
respectively, and the only difference is the extra 2′-OH group on the ribonucleotide sugar …