Lateral root formation and the multiple roles of auxin

Y Du, B Scheres - Journal of experimental botany, 2018 - academic.oup.com
Root systems can display variable architectures that contribute to survival strategies of
plants. The model plant Arabidopsis thaliana possesses a tap root system, in which the …

Learning from co-expression networks: possibilities and challenges

EAR Serin, H Nijveen, HWM Hilhorst… - Frontiers in plant …, 2016 - frontiersin.org
Plants are fascinating and complex organisms. A comprehensive understanding of the
organization, function and evolution of plant genes is essential to disentangle important …

R-loop mediated trans action of the APOLO long noncoding RNA

F Ariel, L Lucero, A Christ, MF Mammarella, T Jegu… - Molecular Cell, 2020 - cell.com
In eukaryotes, three-dimensional genome organization is critical for transcriptional
regulation of gene expression. Long noncoding RNAs (lncRNAs) can modulate chromatin …

Root branching toward water involves posttranslational modification of transcription factor ARF7

B Orosa-Puente, N Leftley, D Von Wangenheim… - Science, 2018 - science.org
Plants adapt to heterogeneous soil conditions by altering their root architecture. For
example, roots branch when in contact with water by using the hydropatterning response …

[HTML][HTML] Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana

SK Powers, AS Holehouse, DA Korasick, KH Schreiber… - Molecular cell, 2019 - cell.com
The phytohormone auxin plays crucial roles in nearly every aspect of plant growth and
development. The auxin response factor (ARF) transcription factor family regulates auxin …

Plant microbiota controls an alternative root branching regulatory mechanism in plants

M Gonin, I Salas-González… - Proceedings of the …, 2023 - National Acad Sciences
The establishment of beneficial interactions with microbes has helped plants to modulate
root branching plasticity in response to environmental cues. However, how the plant …

A single-cell view of the transcriptome during lateral root initiation in Arabidopsis thaliana

HP Gala, A Lanctot, K Jean-Baptiste, S Guiziou… - The Plant …, 2021 - academic.oup.com
Root architecture is a major determinant of plant fitness and is under constant modification in
response to favorable and unfavorable environmental stimuli. Beyond impacts on the …

Two zinc finger proteins with functions in m6A writing interact with HAKAI

M Zhang, Z Bodi, K Mackinnon, S Zhong… - Nature …, 2022 - nature.com
The methyltransferase complex (m6A writer), which catalyzes the deposition of N 6-
methyladenosine (m6A) in mRNAs, is highly conserved across most eukaryotic organisms …

Lateral root formation in Arabidopsis: a well-ordered LRexit

J Banda, K Bellande, D von Wangenheim, T Goh… - Trends in plant …, 2019 - cell.com
Lateral roots (LRs) are crucial for increasing the surface area of root systems to explore
heterogeneous soil environments. Major advances have recently been made in the model …

PANOMICS meets germplasm

W Weckwerth, A Ghatak, A Bellaire… - Plant Biotechnology …, 2020 - Wiley Online Library
Genotyping‐by‐sequencing has enabled approaches for genomic selection to improve
yield, stress resistance and nutritional value. More and more resource studies are emerging …