Survival prediction using gene expression data: a review and comparison

WN Van Wieringen, D Kun, R Hampel… - Computational statistics & …, 2009 - Elsevier
Knowledge of transcription of the human genome might greatly enhance our understanding
of cancer. In particular, gene expression may be used to predict the survival of cancer …

Gene expression profile classification: a review

MH Asyali, D Colak, O Demirkaya… - Current …, 2006 - ingentaconnect.com
In this review, we have discussed the class-prediction and discovery methods that are
applied to gene expression data, along with the implications of the findings. We attempted to …

Use of within-array replicate spots for assessing differential expression in microarray experiments

GK Smyth, J Michaud, HS Scott - Bioinformatics, 2005 - academic.oup.com
Motivation: Spotted arrays are often printed with probes in duplicate or triplicate, but current
methods for assessing differential expression are not able to make full use of the resulting …

Detecting differential gene expression with a semiparametric hierarchical mixture method

MA Newton, A Noueiry, D Sarkar, P Ahlquist - Biostatistics, 2004 - academic.oup.com
Mixture modeling provides an effective approach to the differential expression problem in
microarray data analysis. Methods based on fully parametric mixture models are available …

[HTML][HTML] Gene Expression Is Altered in Piglet Small Intestine by Weaning and Dietary Glutamine Supplementation3

J Wang, L Chen, P Li, X Li, H Zhou, F Wang, D Li… - The Journal of …, 2008 - Elsevier
Dietary supplementation of glutamine prevents intestinal dysfunction and atrophy in
weanling piglets, but the underlying mechanism (s) are largely unknown. This study was …

[HTML][HTML] Liquid chromatography mass spectrometry-based proteomics: biological and technological aspects

YV Karpievitch, AD Polpitiya, GA Anderson… - The annals of applied …, 2010 - ncbi.nlm.nih.gov
Mass spectrometry-based proteomics has become the tool of choice for identifying and
quantifying the proteome of an organism. Though recent years have seen a tremendous …

[图书][B] Batch effects and noise in microarray experiments: sources and solutions

A Scherer - 2009 - Wiley Online Library
High-content, high-density long or short oligonucleotide microarrays for simultaneous
measurement of redundancy of RNA species are nowadays widely used for hypothesis …

Design considerations for efficient and effective microarray studies

MK Kerr - Biometrics, 2003 - academic.oup.com
This article describes the theoretical and practical issues in experimental design for gene
expression microarrays. Specifically, this article 1) discusses the basic principles of design …

[图书][B] Analysis of microarray gene expression data

MLT Lee - 2007 - books.google.com
After genomic sequencing, microarray technology has emerged as a widely used platform
for genomic studies in the life sciences. Microarray technology provides a systematic way to …

A mixture model approach to detecting differentially expressed genes with microarray data

W Pan, J Lin, CT Le - Functional & integrative genomics, 2003 - Springer
An exciting biological advancement over the past few years is the use of microarray
technologies to measure simultaneously the expression levels of thousands of genes. The …