Blowfly genomics: Current insights, knowledge gaps, and future perspectives

DR Parmar, NP Johnston, JF Wallman… - Current Opinion in Insect …, 2024 - Elsevier
Highlights•A quantitative overview of blowfly genetic resources reveals stark knowledge
gaps•Enhanced blowfly genomic data improves species identification, systematics and …

Monophyletic blowflies revealed by phylogenomics

L Yan, T Pape, K Meusemann, SN Kutty, R Meier… - BMC biology, 2021 - Springer
Background Blowflies are ubiquitous insects, often shiny and metallic, and the larvae of
many species provide important ecosystem services (eg, recycling carrion) and are used in …

The age of insects and the revival of the minimum age tree

S Klopfstein - Austral Entomology, 2021 - Wiley Online Library
Deriving node calibrations from fossils remains by far the most common method for attaching
an absolute timescale to a molecular tree. But this' node dating'approach has a credibility …

Genome skimming is a low-cost and robust strategy to assemble complete mitochondrial genomes from ethanol preserved specimens in biodiversity studies

B Trevisan, DMC Alcantara, DJ Machado… - PeerJ, 2019 - peerj.com
Global loss of biodiversity is an ongoing process that concerns both local and global
authorities. Studies of biodiversity mainly involve traditional methods using morphological …

Protein‐encoding ultraconserved elements provide a new phylogenomic perspective of Oestroidea flies (Diptera: Calyptratae)

E Buenaventura, MW Lloyd… - Systematic …, 2021 - Wiley Online Library
The diverse superfamily Oestroidea with more than 15 000 known species includes among
others blow flies, flesh flies, bot flies and the diverse tachinid flies. Oestroidea exhibit …

Evolutionary insights into bot flies (Insecta: Diptera: Oestridae) from comparative analysis of the mitochondrial genomes

X Li, L Yan, T Pape, Y Gao, D Zhang - International Journal of Biological …, 2020 - Elsevier
Bot flies (Oestridae) are obligate endoparasites of mammals, and their extraordinary
diversification is of great importance in understanding the evolution of parasitism. However …

A phylotranscriptomic framework for flesh fly evolution (Diptera, Calyptratae, Sarcophagidae)

L Yan, E Buenaventura, T Pape, S Narayanan Kutty… - …, 2021 - Wiley Online Library
The Sarcophagidae (flesh flies) comprise a large and widely distributed radiation within the
Calyptratae (Diptera). Larval feeding habits are ecologically diverse and include …

Beyond Drosophila: resolving the rapid radiation of schizophoran flies with phylotranscriptomics

KM Bayless, MD Trautwein, K Meusemann, S Shin… - BMC biology, 2021 - Springer
Background The most species-rich radiation of animal life in the 66 million years following
the Cretaceous extinction event is that of schizophoran flies: a third of fly diversity including …

Six-state amino acid recoding is not an effective strategy to offset compositional heterogeneity and saturation in phylogenetic analyses

AM Hernandez, JF Ryan - Systematic Biology, 2021 - academic.oup.com
Six-state amino acid recoding strategies are commonly applied to combat the effects of
compositional heterogeneity and substitution saturation in phylogenetic analyses. While …

Anchored hybrid enrichment challenges the traditional classification of flesh flies (Diptera: Sarcophagidae)

E Buenaventura, K Szpila, BK Cassel… - Systematic …, 2020 - Wiley Online Library
Sarcophagidae is one of the most species‐rich families within the superfamily Oestroidea.
This diversity is usually represented by three lineages: Miltogramminae …