RNA structural dynamics as captured by molecular simulations: a comprehensive overview

J Sponer, G Bussi, M Krepl, P Banáš, S Bottaro… - Chemical …, 2018 - ACS Publications
With both catalytic and genetic functions, ribonucleic acid (RNA) is perhaps the most
pluripotent chemical species in molecular biology, and its functions are intimately linked to …

Translation in prokaryotes

MV Rodnina - Cold Spring Harbor perspectives in …, 2018 - cshperspectives.cshlp.org
This review summarizes our current understanding of translation in prokaryotes, focusing on
the mechanistic and structural aspects of each phase of translation: initiation, elongation …

[HTML][HTML] Breaking cryo-EM resolution barriers to facilitate drug discovery

A Merk, A Bartesaghi, S Banerjee, V Falconieri, P Rao… - Cell, 2016 - cell.com
Recent advances in single-particle cryoelecton microscopy (cryo-EM) are enabling
generation of numerous near-atomic resolution structures for well-ordered protein …

What recent ribosome structures have revealed about the mechanism of translation

TM Schmeing, V Ramakrishnan - Nature, 2009 - nature.com
The high-resolution structures of ribosomal subunits published in 2000 have revolutionized
the field of protein translation. They facilitated the determination and interpretation of …

[图书][B] Three-dimensional electron microscopy of macromolecular assemblies: visualization of biological molecules in their native state

J Frank - 2006 - books.google.com
Cryoelectron microscopy of biological molecules is among the hottest growth areas in
biophysics and structural biology at present, and Frank is arguably the most distinguished …

Structures of the bacterial ribosome at 3.5 A resolution

BS Schuwirth, MA Borovinskaya, CW Hau, W Zhang… - Science, 2005 - science.org
We describe two structures of the intact bacterial ribosome from Escherichia coli determined
to a resolution of 3.5 angstroms by x-ray crystallography. These structures provide a detailed …

The molecular mechanics of eukaryotic translation

LD Kapp, JR Lorsch - Annual review of biochemistry, 2004 - annualreviews.org
▪ Abstract Great advances have been made in the past three decades in understanding the
molecular mechanics underlying protein synthesis in bacteria, but our understanding of the …

Locking and unlocking of ribosomal motions

M Valle, A Zavialov, J Sengupta, U Rawat… - Cell, 2003 - cell.com
During the ribosomal translocation, the binding of elongation factor G (EF-G) to the
pretranslocational ribosome leads to a ratchet-like rotation of the 30S subunit relative to the …

Fidelity at the molecular level: lessons from protein synthesis

HS Zaher, R Green - Cell, 2009 - cell.com
The faithful and rapid translation of genetic information into peptide sequences is an
indispensable property of the ribosome. The mechanistic understanding of strategies used …

Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation

CMT Spahn, MG Gomez‐Lorenzo, RA Grassucci… - The EMBO …, 2004 - embopress.org
An 11.7‐Å‐resolution cryo‐EM map of the yeast 80S· eEF2 complex in the presence of the
antibiotic sordarin was interpreted in molecular terms, revealing large conformational …