Inferred allelic variants of immunoglobulin receptor genes: a system for their evaluation, documentation, and naming

M Ohlin, C Scheepers, M Corcoran, WD Lees… - Frontiers in …, 2019 - frontiersin.org
Immunoglobulins or antibodies are the main effector molecules of the B-cell lineage and are
encoded by hundreds of variable (V), diversity (D), and joining (J) germline genes, which …

Rhesus and cynomolgus macaque immunoglobulin heavy-chain genotyping yields comprehensive databases of germline VDJ alleles

NV Bernat, M Corcoran, I Nowak, M Kaduk, XC Dopico… - Immunity, 2021 - cell.com
Definition of the specific germline immunoglobulin (Ig) alleles present in an individual is a
critical first step to delineate the ontogeny and evolution of antigen-specific antibody …

Immunoglobulin gene analysis as a tool for investigating human immune responses

D Dunn‐Walters, C Townsend, E Sinclair… - Immunological …, 2018 - Wiley Online Library
The human immunoglobulin repertoire is a hugely diverse set of sequences that are formed
by processes of gene rearrangement, heavy and light chain gene assortment, class …

Mosaic deletion patterns of the human antibody heavy chain gene locus shown by Bayesian haplotyping

M Gidoni, O Snir, A Peres, P Polak, I Lindeman… - Nature …, 2019 - nature.com
Abstract Analysis of antibody repertoires by high-throughput sequencing is of major
importance in understanding adaptive immune responses. Our knowledge of variations in …

Analysis of IGH allele content in a sample group of rheumatoid arthritis patients demonstrates unrevealed population heterogeneity

U Hardt, MM Corcoran, S Narang… - Frontiers in …, 2023 - frontiersin.org
Immunoglobulin heavy chain (IGH) germline gene variations influence the B cell receptor
repertoire, with resulting biological consequences such as shaping our response to …

[HTML][HTML] Parallel antibody germline gene and haplotype analyses support the validity of immunoglobulin germline gene inference and discovery

U Kirik, L Greiff, F Levander, M Ohlin - Molecular immunology, 2017 - Elsevier
Abstract Analysis of antibody repertoire development and specific antibody responses
important for eg autoimmune conditions, allergy, and protection against disease is …

De novo Inference of Diversity Genes and Analysis of Non-canonical V(DD)J Recombination in Immunoglobulins

Y Safonova, PA Pevzner - Frontiers in immunology, 2019 - frontiersin.org
The V (D) J recombination forms the immunoglobulin genes by joining the variable (V),
diversity (D), and joining (J) germline genes. Since variations in germline genes have been …

Poorly expressed alleles of several human immunoglobulin heavy chain variable genes are common in the human population

M Ohlin - Frontiers in immunology, 2021 - frontiersin.org
Extensive diversity has been identified in the human heavy chain immunoglobulin locus,
including allelic variation, gene duplication, and insertion/deletion events. Several genes …

Antibody heavy chain variable domains of different germline gene origins diversify through different paths

U Kirik, H Persson, F Levander, L Greiff… - Frontiers in …, 2017 - frontiersin.org
B cells produce antibodies, key effector molecules in health and disease. They mature their
properties, including their affinity for antigen, through hypermutation events; processes that …

Frequent use of IGHV3-30-3 in SARS-CoV-2 neutralizing antibody responses

P Pushparaj, A Nicoletto, X Castro Dopico… - Frontiers in …, 2023 - frontiersin.org
The antibody response to SARS-CoV-2 shows biased immunoglobulin heavy chain variable
(IGHV) gene usage, allowing definition of genetic signatures for some classes of neutralizing …