Yeast genetic interaction screens in the age of CRISPR/Cas

NR Adames, JE Gallegos, J Peccoud - Current genetics, 2019 - Springer
The ease of performing both forward and reverse genetics in Saccharomyces cerevisiae,
along with its stable haploid state and short generation times, has made this budding yeast …

Algorithms for regulatory network inference and experiment planning in systems biology

A Pratapa - 2020 - vtechworks.lib.vt.edu
I present novel solutions to two different classes of computational problems that arise in the
study of complex cellular processes. The first problem arises in the context of planning large …

Efficient Synthesis of Mutants Using Genetic Crosses

A Pratapa, AP Jalihal, SS Ravi, TM Murali - Proceedings of the 2018 …, 2018 - dl.acm.org
The genetic cross is a fundamental, flexible, and widely-used experimental technique to
create new mutant strains from existing ones. Surprisingly, the problem of how to efficiently …