[HTML][HTML] Integrating cellular electron microscopy with multimodal data to explore biology across space and time

CL McCafferty, S Klumpe, RE Amaro, W Kukulski… - Cell, 2024 - cell.com
Biology spans a continuum of length and time scales. Individual experimental methods only
glimpse discrete pieces of this spectrum but can be combined to construct a more holistic …

Giant mitochondria in human liver disease

GJ Shami, IV Samarska, GH Koek, A Li… - Liver …, 2023 - Wiley Online Library
This thematic review aims to provide an overview of the current state of knowledge about the
occurrence of giant mitochondria or megamitochondria in liver parenchymal cells. Their …

Virtual Fly Brain—An interactive atlas of the Drosophila nervous system

R Court, M Costa, C Pilgrim, G Millburn… - Frontiers in …, 2023 - frontiersin.org
As a model organism, Drosophila is uniquely placed to contribute to our understanding of
how brains control complex behavior. Not only does it have complex adaptive behaviors, but …

Multi-layered maps of neuropil with segmentation-guided contrastive learning

S Dorkenwald, PH Li, M Januszewski, DR Berger… - Nature …, 2023 - nature.com
Maps of the nervous system that identify individual cells along with their type, subcellular
components and connectivity have the potential to elucidate fundamental organizational …

Quantitative census of local somatic features in mouse visual cortex

L Elabbady, S Seshamani, S Mu, G Mahalingam… - bioRxiv, 2022 - biorxiv.org
Mammalian neocortex contains a highly diverse set of cell types. These types have been
mapped systematically using a variety of molecular, electrophysiological and morphological …

NEURD: automated proofreading and feature extraction for connectomics

B Celii - 2024 - search.proquest.com
We are now in the era of millimeter-scale electron microscopy (EM) volumes collected at
nanometer resolution. Dense reconstruction of cellular compartments in these EM volumes …

Made to measure: An introduction to quantifying microscopy data in the life sciences

S Culley, AC Caballero, JJ Burden… - Journal of …, 2024 - Wiley Online Library
Images are at the core of most modern biological experiments and are used as a major
source of quantitative information. Numerous algorithms are available to process images …

NeuroAI for AI Safety

P Mineault, N Zanichelli, JZ Peng, A Arkhipov… - arXiv preprint arXiv …, 2024 - arxiv.org
As AI systems become increasingly powerful, the need for safe AI has become more
pressing. Humans are an attractive model for AI safety: as the only known agents capable of …

Spatial transcriptomics-correlated electron microscopy

P Androvic, M Schifferer, KP Anderson… - bioRxiv, 2022 - biorxiv.org
Current spatial transcriptomics methods identify cell states in a spatial context but lack
morphological information. Scanning electron microscopy, in contrast, provides structural …

Finding the right type of cell

LK Scheffer - Elife, 2023 - elifesciences.org
Machine Learning: Finding the right type of cell | eLife Skip to Content eLife logo eLife home
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