Machine learning-assisted identification of environmental pollutants by liquid chromatography coupled with high-resolution mass spectrometry

H Wang, L Zhong, W Su, T Ruan, G Jiang - TrAC Trends in Analytical …, 2024 - Elsevier
Chemical exposure can be linked with various adverse effects, but the causal association is
still poorly understood. To meet the challenge, non-target screening (NTS) based on liquid …

Prediction of liquid chromatographic retention time with graph neural networks to assist in small molecule identification

Q Yang, H Ji, H Lu, Z Zhang - Analytical Chemistry, 2021 - ACS Publications
The predicted liquid chromatographic retention times (RTs) of small molecules are not
accurate enough for wide adoption in structural identification. In this study, we used the …

Automated method development in high-pressure liquid chromatography

E Bosten, A Kensert, G Desmet, D Cabooter - Journal of Chromatography A, 2024 - Elsevier
Method development in liquid chromatography is a crucial step in the optimization of
analytical separations for various applications. However, it is often a challenging endeavour …

Deep learning for retention time prediction in reversed-phase liquid chromatography

ES Fedorova, DD Matyushin, IV Plyushchenko… - … of Chromatography A, 2022 - Elsevier
Retention time prediction in high-performance liquid chromatography (HPLC) is the subject
of many studies since it can improve the identification of unknown molecules in untargeted …

Joint structural annotation of small molecules using liquid chromatography retention order and tandem mass spectrometry data

E Bach, EL Schymanski, J Rousu - Nature Machine Intelligence, 2022 - nature.com
Structural annotation of small molecules in biological samples remains a key bottleneck in
untargeted metabolomics, despite rapid progress in predictive methods and tools during the …

[HTML][HTML] Development of a single retention time prediction model integrating multiple liquid chromatography systems: application to new psychoactive substances

D Pasin, CB Mollerup, BS Rasmussen, K Linnet… - Analytica Chimica …, 2021 - Elsevier
Database-driven suspect screening has proven to be a useful tool to detect new
psychoactive substances (NPS) outside the scope of targeted screening; however, the lack …

Retention time prediction with message-passing neural networks

S Osipenko, E Nikolaev, Y Kostyukevich - Separations, 2022 - mdpi.com
Retention time prediction, facilitated by advances in machine learning, has become a useful
tool in untargeted LC-MS applications. State-of-the-art approaches include graph neural …

Retention time dataset for heterogeneous molecules in reversed–phase liquid chromatography

Y Zhang, F Liu, XQ Li, Y Gao, KC Li, QH Zhang - Scientific Data, 2024 - nature.com
Quantitative structure–property relationships have been extensively studied in the field of
predicting retention times in liquid chromatography (LC). However, making transferable …

Probabilistic metabolite annotation using retention time prediction and meta-learned projections

CA García, A Gil-de-la-Fuente, C Barbas… - Journal of …, 2022 - Springer
Retention time information is used for metabolite annotation in metabolomic experiments.
But its usefulness is hindered by the availability of experimental retention time data in …

Gas chromatographic retention index prediction using multimodal machine learning

DD Matyushin, AK Buryak - Ieee Access, 2020 - ieeexplore.ieee.org
Gas chromatography is a widely used method in analytical chemistry and metabolomics.
Using gas chromatography, vaporizable compounds can be separated for their further …