Quicksilver: Fast predictive image registration–a deep learning approach

X Yang, R Kwitt, M Styner, M Niethammer - NeuroImage, 2017 - Elsevier
This paper introduces Quicksilver, a fast deformable image registration method. Quicksilver
registration for image-pairs works by patch-wise prediction of a deformation model based …

Learning a probabilistic model for diffeomorphic registration

J Krebs, H Delingette, B Mailhé… - IEEE transactions on …, 2019 - ieeexplore.ieee.org
We propose to learn a low-dimensional probabilistic deformation model from data which can
be used for the registration and the analysis of deformations. The latent variable model …

Dreaming more data: Class-dependent distributions over diffeomorphisms for learned data augmentation

S Hauberg, O Freifeld, ABL Larsen… - Artificial intelligence …, 2016 - proceedings.mlr.press
Data augmentation is a key element in training high-dimensional models. In this approach,
one synthesizes new observations by applying pre-specified transformations to the original …

Deepflash: An efficient network for learning-based medical image registration

J Wang, M Zhang - … of the IEEE/CVF conference on …, 2020 - openaccess.thecvf.com
This paper presents DeepFLASH, a novel network with efficient training and inference for
learning-based medical image registration. In contrast to existing approaches that learn …

Fast diffeomorphic image registration via fourier-approximated lie algebras

M Zhang, PT Fletcher - International Journal of Computer Vision, 2019 - Springer
This paper introduces Fourier-approximated Lie algebras for shooting (FLASH), a fast
geodesic shooting algorithm for diffeomorphic image registration. We approximate the …

Deep diffeomorphic transformer networks

NS Detlefsen, O Freifeld… - Proceedings of the IEEE …, 2018 - openaccess.thecvf.com
Spatial Transformer layers allow neural networks, at least in principle, to be invariant to large
spatial transformations in image data. The model has, however, seen limited uptake as most …

Frequency diffeomorphisms for efficient image registration

M Zhang, R Liao, AV Dalca, EA Turk, J Luo… - … Processing in Medical …, 2017 - Springer
This paper presents an efficient algorithm for large deformation diffeomorphic metric
mapping (LDDMM) with geodesic shooting for image registration. We introduce a novel finite …

Diffeomorphic temporal alignment nets

RA Shapira Weber, M Eyal, N Skafte… - Advances in neural …, 2019 - proceedings.neurips.cc
Time-series analysis is confounded by nonlinear time warping of the data. Traditional
methods for joint alignment do not generalize: after aligning a given signal ensemble, they …

Fast GPU 3D diffeomorphic image registration

M Brunn, N Himthani, G Biros, M Mehl… - Journal of parallel and …, 2021 - Elsevier
Abstract 3D image registration is one of the most fundamental and computationally
expensive operations in medical image analysis. Here, we present a mixed-precision …

CLAIRE: A distributed-memory solver for constrained large deformation diffeomorphic image registration

A Mang, A Gholami, C Davatzikos, G Biros - SIAM Journal on Scientific …, 2019 - SIAM
With this work we release CLAIRE, a distributed-memory implementation of an effective
solver for constrained large deformation diffeomorphic image registration problems in three …