Population management has the primary task of maximizing the long-term competitiveness
of a breed. Breeds compete with each other for being able to supply consumer demands at …

Massively parallel reporter assays (MPRAs) are powerful tools for quantifying the impacts of
sequence variation on gene expression. Reading out molecular phenotypes with …

The relationship between noncoding DNA sequence and gene expression is not well-
understood. Massively parallel reporter assays (MPRAs), which quantify the regulatory …

Despite decades of intense genetic, biochemical, and evolutionary characterizations of
bacterial promoters, we lack the ability to identify or predict transcriptional activities of …

The control of the coordinated expression of genes is primarily regulated by the interactions
between transcription factors (TFs) and their DNA binding sites, which are an integral part of …

Deep learning has been successfully applied to surprisingly different domains. Researchers
and practitioners are employing trained deep learning models to enrich our knowledge …

The codon usage bias (CUB) is part of a long standing research in biology, trying to
understand the genome, this lengthy protein composed of amino acids (aa) referenced to by …