Phenolic secondary metabolites are only produced by plants wherein they play important
roles in both biotic and abiotic defense in seed plants as well as being potentially important …

Inferring gene regulatory networks (GRNs) is a fundamental challenge in biology that aims
to unravel the complex relationships between genes and their regulators. Deciphering these …

Gene co-expression network analysis has been shown effective in identifying functional co-
expressed gene modules associated with complex human diseases. However, existing …

GLay provides Cytoscape users an assorted collection of versatile community structure
algorithms and graph layout functions for network clustering and structured visualization …

Coexpression of mRNAs under multiple conditions is commonly used to infer cofunctionality
of their gene products despite well-known limitations of this" guilt-by-association"(GBA) …

Plant biosynthesis involves numerous specialized metabolites with diverse chemical natures
and biological activities. The biosynthesis of metabolites often exclusively occurs in …

The gene regulatory network (GRN) reveals the regulatory relationships among genes and
can provide a systematic understanding of molecular mechanisms underlying biological …

Elevated salinity significantly threatens cotton growth, particularly during the germination
and seedling stages. The utilization of primitive species of Gossypium hirsutum, specifically …

We present SEEK (search-based exploration of expression compendia; http://seek.
princeton. edu/), a query-based search engine for very large transcriptomic data collections …

Background Nitrogen (N) is an essential and often limiting nutrient to plant growth and
development. Previous studies have shown that the mRNA expressions of numerous genes …