Green plant genomes: What we know in an era of rapidly expanding opportunities

WJ Kress, DE Soltis, PJ Kersey… - Proceedings of the …, 2022 - National Acad Sciences
Green plants play a fundamental role in ecosystems, human health, and agriculture. As de
novo genomes are being generated for all known eukaryotic species as advocated by the …

Molecular tools for adapting viticulture to climate change

É Gomès, P Maillot, É Duchêne - Frontiers in Plant Science, 2021 - frontiersin.org
Adaptation of viticulture to climate change includes exploration of new geographical areas,
new training systems, new management practices, or new varieties, both for rootstocks and …

Long non-coding RNAs coordinate developmental transitions and other key biological processes in grapevine

G Bhatia, S Sharma, SK Upadhyay, K Singh - Scientific Reports, 2019 - nature.com
Long non-coding RNAs (lncRNAs) are transcripts> 200 nucleotides that have prominently
surfaced as dynamic regulatory molecules. Using computational approaches, we identified …

Construction of a High-Density Genetic Map and Mapping of Firmness in Grapes (Vitis vinifera L.) Based on Whole-Genome Resequencing

J Jiang, X Fan, Y Zhang, X Tang, X Li, C Liu… - International Journal of …, 2020 - mdpi.com
Berry firmness is one of the most important quality traits in table grapes. The underlying
molecular and genetic mechanisms for berry firmness remain unclear. We constructed a …

Multi-dimensional leaf phenotypes reflect root system genotype in grafted grapevine over the growing season

ZN Harris, M Awale, N Bhakta, DH Chitwood… - …, 2021 - academic.oup.com
Background Modern biological approaches generate volumes of multi-dimensional data,
offering unprecedented opportunities to address biological questions previously beyond …

The genomics of grape berry ripening

R Falchi, DCJ Wong, Y Yan, S Savoi, GA Gambetta… - The grape genome, 2019 - Springer
Because of their economic and cultural importance, grapes are arguably the most studied
fruit crop and are considered a model system for research on non-climacteric fruits. The …

Long noncoding RNA s and mi RNA s regulating terpene and tartaric acid biosynthesis in rose‐scented geranium

LK Narnoliya, G Kaushal, SP Singh - FEBS letters, 2019 - Wiley Online Library
This study aimed to explore the noncoding RNA s, which have emerged as key regulatory
molecules in biological processes, in rose‐scented geranium. We analyzed RNA‐seq data …

[HTML][HTML] Genome-Wide Association Study of Grape Texture Based on Puncture

M Lin, L Sun, X Liu, X Fan, Y Zhang, J Jiang… - International Journal of …, 2024 - mdpi.com
Grapes are grown extensively around the world and play a crucial role in overall fruit
production globally. The quality of the grape is largely determined by the texture of the flesh …

Vitis vinifera (grapevine) lncRNAs are potential regulators of response to necrotrophic fungus, Botrytis cinerea infection

G Bhatia, SK Upadhyay, K Singh - Physiological and Molecular Plant …, 2020 - Elsevier
Abstract lncRNAs regulate gene expression at both transcriptional and post-transcriptional
levels. Using computational strategy, we identified 47 and 179 V. vinifera lncRNAs and …

Distribution, characteristics, and regulatory potential of long noncoding RNAs in brown‐rot fungi

A Borgognone, W Sanseverino… - … journal of genomics, 2019 - Wiley Online Library
Long noncoding RNAs have been thoroughly studied in plants, animals, and yeasts, where
they play important roles as regulators of transcription. Nevertheless, almost nothing is …