Loss-of-function genetic tools for animal models: cross-species and cross-platform differences

BE Housden, M Muhar, M Gemberling… - Nature Reviews …, 2017 - nature.com
Our understanding of the genetic mechanisms that underlie biological processes has relied
extensively on loss-of-function (LOF) analyses. LOF methods target DNA, RNA or protein to …

A comprehensive review of indel detection methods for identification of zebrafish knockout mutants generated by genome-editing nucleases

B Carrington, K Bishop, R Sood - Genes, 2022 - mdpi.com
The use of zebrafish in functional genomics and disease modeling has become popular due
to the ease of targeted mutagenesis with genome editing nucleases, ie, zinc finger …

Generation of gene edited birds in one generation using sperm transfection assisted gene editing (STAGE)

CA Cooper, A Challagulla, KA Jenkins, TG Wise… - Transgenic …, 2017 - Springer
Generating transgenic and gene edited mammals involves in vitro manipulation of oocytes
or single cell embryos. Due to the comparative inaccessibility of avian oocytes and single …

Gene editing by CRISPR/Cas9 in the obligatory outcrossing Medicago sativa

R Gao, BA Feyissa, M Croft, A Hannoufa - Planta, 2018 - Springer
Abstract Main conclusion The CRISPR/Cas9 technique was successfully used to edit the
genome of the obligatory outcrossing plant species Medicago sativa L.(alfalfa). RNA-guided …

Application and optimization of CRISPR–Cas9-mediated genome engineering in axolotl (Ambystoma mexicanum)

JF Fei, WPK Lou, D Knapp, P Murawala, T Gerber… - Nature …, 2018 - nature.com
Genomic manipulation is essential to the use of model organisms to understand
development, regeneration and adult physiology. The axolotl (Ambystoma mexicanum), a …

CRISPR/Cas9 Genome Editing Introduction and Optimization in the Non-model Insect Pyrrhocoris apterus

J Kotwica-Rolinska, L Chodakova, D Chvalova… - Frontiers in …, 2019 - frontiersin.org
The CRISPR/Cas9 technique is widely used in experimentation with human cell lines as
well as with other model systems, such as mice Mus musculus, zebrafish Danio reiro, and …

The gene regulatory basis of genetic compensation during neural crest induction

CM Dooley, N Wali, IM Sealy, RJ White… - PLoS …, 2019 - journals.plos.org
The neural crest (NC) is a vertebrate-specific cell type that contributes to a wide range of
different tissues across all three germ layers. The gene regulatory network (GRN) …

Evaluation of CRISPR gene-editing tools in zebrafish

JM Uribe-Salazar, G Kaya, A Sekar, KC Weyenberg… - BMC genomics, 2022 - Springer
Background Zebrafish have practical features that make them a useful model for higher-
throughput tests of gene function using CRISPR/Cas9 editing to create 'knockout'models. In …

Loss of the homologous recombination gene rad51 leads to Fanconi anemia-like symptoms in zebrafish

JG Botthof, E Bielczyk-Maczyńska… - Proceedings of the …, 2017 - National Acad Sciences
RAD51 is an indispensable homologous recombination protein, necessary for strand
invasion and crossing over. It has recently been designated as a Fanconi anemia (FA) gene …

[HTML][HTML] Pyridox (am) ine 5′-phosphate oxidase (PNPO) deficiency in zebrafish results in fatal seizures and metabolic aberrations

J Ciapaite, M Albersen, SMC Savelberg… - … et Biophysica Acta (BBA …, 2020 - Elsevier
Abstract Pyridox (am) ine 5′-phosphate oxidase (PNPO) catalyzes oxidation of pyridoxine
5′-phosphate (PNP) and pyridoxamine 5′-phosphate (PMP) to pyridoxal 5′-phosphate …