Overview on Sobemoviruses and a Proposal for the Creation of the Family Sobemoviridae

M Sõmera, C Sarmiento, E Truve - Viruses, 2015 - mdpi.com
The genus Sobemovirus, unassigned to any family, consists of viruses with single-stranded
plus-oriented single-component RNA genomes and small icosahedral particles. Currently …

Role of plant virus movement proteins in suppression of host RNAi defense

AK Atabekova, AD Solovieva, DA Chergintsev… - International Journal of …, 2023 - mdpi.com
One of the systems of plant defense against viral infection is RNA silencing, or RNA
interference (RNAi), in which small RNAs derived from viral genomic RNAs and/or mRNAs …

[HTML][HTML] An essential fifth coding ORF in the sobemoviruses

R Ling, AE Pate, JP Carr, AE Firth - Virology, 2013 - Elsevier
The sobemoviruses have one of the smallest of all known RNA virus genomes. ORF1
encodes P1 which plays a role in suppression of silencing and virus movement, ORFs 2a …

Mutations in Rice yellow mottle virus Polyprotein P2a Involved in RYMV2 Gene Resistance Breakdown

A Pinel-Galzi, C Dubreuil-Tranchant… - Frontiers in Plant …, 2016 - frontiersin.org
Rice yellow mottle virus (RYMV) is one of the major diseases of rice in Africa. The high
resistance of the Oryza glaberrima Tog7291 accession involves a null allele of the RYMV2 …

A novel ilarvirus protein CP-RT is expressed via stop codon readthrough and suppresses RDR6-dependent RNA silencing

N Lukhovitskaya, K Brown, L Hua, AE Pate… - PLoS …, 2024 - journals.plos.org
Ilarviruses are a relatively understudied but important group of plant RNA viruses that
includes a number of crop pathogens. Their genomes comprise three RNA segments …

Sequencing and biological characterization of historical cynosurus mottle virus isolates from Germany

M Frei, C Sarmiento, K Kärblane, A Niehl, M Sõmera - Archives of Virology, 2023 - Springer
We report sequencing of four historical cynosurus mottle virus (CnMoV) isolates, originating
from different hosts and locations. The CnMoV genome, ranging from 4417 to 4419 nt …

[HTML][HTML] Assembly of plant virus agroinfectious clones using biological material or DNA synthesis

F Pasin - STAR protocols, 2022 - Elsevier
Infectious clone technology is universally applied for biological characterization and
engineering of viruses. This protocol describes procedures that implement synthetic biology …

Oligonucleotide abundance biases aid design of a type IIS synthetic genomics framework with plant virome capacity

F Pasin - Biotechnology Journal, 2021 - Wiley Online Library
Synthetic genomics‐driven dematerialization of genetic resources facilitates flexible
hypothesis testing and rapid product development. Biological sequences have …

VPg impact on ryegrass mottle virus serine-like 3C protease proteolysis and structure

G Kalnins, R Ludviga, I Kalnciema, G Resevica… - International Journal of …, 2023 - mdpi.com
Sobemoviruses encode serine-like 3C proteases (Pro) that participate in the processing and
maturation of other virus-encoded proteins. Its cis and trans activity is mediated by the …

Cymbidium chlorotic mosaic virus, a new sobemovirus isolated from a spring orchid (Cymbidium goeringii) in Japan

H Kondo, S Takemoto, K Maruyama, S Chiba… - Archives of …, 2015 - Springer
Cymbidium chlorotic mosaic virus (CyCMV), isolated from a spring orchid (Cymbidium
goeringii), was characterized molecularly. CyCMV isometric virions comprise a single …