A survey on artificial intelligence in histopathology image analysis

MM Abdelsamea, U Zidan, Z Senousy… - … : Data Mining and …, 2022 - Wiley Online Library
The increasing adoption of the whole slide image (WSI) technology in histopathology has
dramatically transformed pathologists' workflow and allowed the use of computer systems in …

A guide to artificial intelligence for cancer researchers

R Perez-Lopez, N Ghaffari Laleh, F Mahmood… - Nature Reviews …, 2024 - nature.com
Artificial intelligence (AI) has been commoditized. It has evolved from a specialty resource to
a readily accessible tool for cancer researchers. AI-based tools can boost research …

Towards a general-purpose foundation model for computational pathology

RJ Chen, T Ding, MY Lu, DFK Williamson, G Jaume… - Nature Medicine, 2024 - nature.com
Quantitative evaluation of tissue images is crucial for computational pathology (CPath) tasks,
requiring the objective characterization of histopathological entities from whole-slide images …

Transformer-based biomarker prediction from colorectal cancer histology: A large-scale multicentric study

SJ Wagner, D Reisenbüchler, NP West, JM Niehues… - Cancer Cell, 2023 - cell.com
Deep learning (DL) can accelerate the prediction of prognostic biomarkers from routine
pathology slides in colorectal cancer (CRC). However, current approaches rely on …

Scaling self-supervised learning for histopathology with masked image modeling

A Filiot, R Ghermi, A Olivier, P Jacob, L Fidon… - medRxiv, 2023 - medrxiv.org
Computational pathology is revolutionizing the field of pathology by integrating advanced
computer vision and machine learning technologies into diagnostic workflows. It offers …

Validation of MSIntuit as an AI-based pre-screening tool for MSI detection from colorectal cancer histology slides

C Saillard, R Dubois, O Tchita, N Loiseau… - Nature …, 2023 - nature.com
Abstract Mismatch Repair Deficiency (dMMR)/Microsatellite Instability (MSI) is a key
biomarker in colorectal cancer (CRC). Universal screening of CRC patients for MSI status is …

Generalizable biomarker prediction from cancer pathology slides with self-supervised deep learning: A retrospective multi-centric study

JM Niehues, P Quirke, NP West, HI Grabsch… - Cell reports …, 2023 - cell.com
Deep learning (DL) can predict microsatellite instability (MSI) from routine histopathology
slides of colorectal cancer (CRC). However, it is unclear whether DL can also predict other …

Interpretable deep learning model to predict the molecular classification of endometrial cancer from haematoxylin and eosin-stained whole-slide images: a combined …

S Fremond, S Andani, JB Wolf, J Dijkstra… - The Lancet Digital …, 2023 - thelancet.com
Background Endometrial cancer can be molecularly classified into POLE mut, mismatch
repair deficient (MMRd), p53 abnormal (p53abn), and no specific molecular profile (NSMP) …

AI-based histopathology image analysis reveals a distinct subset of endometrial cancers

A Darbandsari, H Farahani, M Asadi, M Wiens… - Nature …, 2024 - nature.com
Endometrial cancer (EC) has four molecular subtypes with strong prognostic value and
therapeutic implications. The most common subtype (NSMP; No Specific Molecular Profile) …

Self-supervised attention-based deep learning for pan-cancer mutation prediction from histopathology

OL Saldanha, CML Loeffler, JM Niehues… - NPJ Precision …, 2023 - nature.com
The histopathological phenotype of tumors reflects the underlying genetic makeup. Deep
learning can predict genetic alterations from pathology slides, but it is unclear how well …