Genomic characterization of emerging sars-cov-2: A systematic review

S Sharma, R Rani, N Kalra - Current Bioinformatics, 2023 - ingentaconnect.com
Introduction: Severe Acute Respiratory Syndrome Coronavirus–2, SARS-CoV-2, is a
wellknown virus for its fatal infectivity and widespread impact on the health of the worldwide …

Analyzing rare mutations in metagenomes assembled using long and accurate reads

MW Fedarko, M Kolmogorov, PA Pevzner - Genome research, 2022 - genome.cshlp.org
The advent of long and accurate “HiFi” reads has greatly improved our ability to generate
complete metagenome-assembled genomes (MAGs), enabling “complete metagenomics” …

Intrahost SARS-CoV-2 k-mer identification method (iSKIM) for rapid detection of mutations of concern reveals emergence of global mutation patterns

A Thommana, M Shakya, J Gandhi, CK Fung… - Viruses, 2022 - mdpi.com
Despite unprecedented global sequencing and surveillance of SARS-CoV-2, timely
identification of the emergence and spread of novel variants of concern (VoCs) remains a …

An FPGA Accelerator for Genome Variant Calling

T Xu, S Rixner, AL Cox - ACM Transactions on Reconfigurable …, 2023 - dl.acm.org
In genome analysis, it is often important to identify variants from a reference genome.
However, identifying variants that occur with low frequency can be challenging, as it is …

Analyzing rare mutations in metagenomes assembled using long and accurate reads

MW Fedarko, M Kolmogorov, PA Pevzner - Genome Research, 2022 - escholarship.org
The advent of long and accurate" HiFi" reads has greatly improved our ability to generate
complete metagenome-assembled genomes (MAGs), enabling" complete metagenomics" …

[引用][C] Nicolae Sapoval

N Sapoval