Advances and limits of using population genetics to understand local adaptation

P Tiffin, J Ross-Ibarra - Trends in ecology & evolution, 2014 - cell.com
Local adaptation shapes species diversity, can be a stepping stone to ecological speciation,
and can facilitate species range expansion. Population genetic analyses, which complement …

Genotype-by-environment interaction and plasticity: exploring genomic responses of plants to the abiotic environment

DL Des Marais, KM Hernandez… - Annual Review of …, 2013 - annualreviews.org
There is considerable interest in the occurrence and molecular mechanisms of phenotypic
plasticity and genotype-by-environment interactions (G× E) in plant populations. The …

Genotype× environment interaction QTL mapping in plants: lessons from Arabidopsis

M El-Soda, M Malosetti, BJ Zwaan, M Koornneef… - Trends in plant …, 2014 - cell.com
Plant growth and development are influenced by the genetic composition of the plant (G),
the environment (E), and the interaction between them (G× E). To produce suitable …

Integration of multi-omics techniques and physiological phenotyping within a holistic phenomics approach to study senescence in model and crop plants

DK Großkinsky, SJ Syaifullah… - Journal of Experimental …, 2018 - academic.oup.com
The study of senescence in plants is complicated by diverse levels of temporal and spatial
dynamics as well as the impact of external biotic and abiotic factors and crop plant …

Lagging adaptation to warming climate in Arabidopsis thaliana

AM Wilczek, MD Cooper… - Proceedings of the …, 2014 - National Acad Sciences
If climate change outpaces the rate of adaptive evolution within a site, populations
previously well adapted to local conditions may decline or disappear, and banked seeds …

Early life stages contribute strongly to local adaptation in Arabidopsis thaliana

FM Postma, J Ågren - … of the National Academy of Sciences, 2016 - National Acad Sciences
The magnitude and genetic basis of local adaptation is of fundamental interest in
evolutionary biology. However, field experiments usually do not consider early life stages …

Balancing selection via life-history trade-offs maintains an inversion polymorphism in a seaweed fly

C Mérot, V Llaurens, E Normandeau… - Nature …, 2020 - nature.com
How natural diversity is maintained is an evolutionary puzzle. Genetic variation can be
eroded by drift and directional selection but some polymorphisms persist for long time …

Phenotyping and beyond: modelling the relationships between traits

C Granier, D Vile - Current opinion in plant biology, 2014 - Elsevier
Highlights•Phenotyping platforms for measuring plant traits at different scales are
developed.•Need for data storage and analyses introduced the notion of phenotyping …

Genetic architecture of flowering time differs between populations with contrasting demographic and selective histories

C Neto, A Hancock - Molecular Biology and Evolution, 2023 - academic.oup.com
Understanding the evolutionary factors that impact the genetic architecture of traits is a
central goal of evolutionary genetics. Here, we investigate how quantitative trait variation …

Adaptive divergence in flowering time among natural populations of Arabidopsis thaliana: Estimates of selection and QTL mapping

J Ågren, CG Oakley, S Lundemo, DW Schemske - Evolution, 2017 - academic.oup.com
To identify the ecological and genetic mechanisms of local adaptation requires estimating
selection on traits, identifying their genetic basis, and evaluating whether divergence in …