Smart health: Big data enabled health paradigm within smart cities

MI Pramanik, RYK Lau, H Demirkan… - Expert Systems with …, 2017 - Elsevier
In the era of “big data”, recent developments in the area of information and communication
technologies (ICT) are facilitating organizations to innovate and grow. These technological …

Genome interpretation using in silico predictors of variant impact

P Katsonis, K Wilhelm, A Williams, O Lichtarge - Human genetics, 2022 - Springer
Estimating the effects of variants found in disease driver genes opens the door to
personalized therapeutic opportunities. Clinical associations and laboratory experiments …

Omicron (BA. 1) and sub‐variants (BA. 1.1, BA. 2, and BA. 3) of SARS‐CoV‐2 spike infectivity and pathogenicity: A comparative sequence and structural‐based …

S Kumar, K Karuppanan… - Journal of medical …, 2022 - Wiley Online Library
The Omicron variant of the severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2)
has now spread throughout the world. We used computational tools to assess the spike …

REVEL: an ensemble method for predicting the pathogenicity of rare missense variants

NM Ioannidis, JH Rothstein, V Pejaver… - The American Journal of …, 2016 - cell.com
The vast majority of coding variants are rare, and assessment of the contribution of rare
variants to complex traits is hampered by low statistical power and limited functional data …

SOD1 mutations associated with amyotrophic lateral sclerosis analysis of variant severity

M Berdyński, P Miszta, K Safranow, PM Andersen… - Scientific Reports, 2022 - nature.com
Mutations in superoxide dismutase 1 gene (SOD1) are linked to amyotrophic lateral
sclerosis (ALS), a neurodegenerative disorder predominantly affecting upper and lower …

Better prediction of functional effects for sequence variants

M Hecht, Y Bromberg, B Rost - BMC genomics, 2015 - Springer
Elucidating the effects of naturally occurring genetic variation is one of the major challenges
for personalized health and personalized medicine. Here, we introduce SNAP2, a novel …

ALK mutations confer differential oncogenic activation and sensitivity to ALK inhibition therapy in neuroblastoma

SC Bresler, DA Weiser, PJ Huwe, JH Park, K Krytska… - Cancer cell, 2014 - cell.com
Genetic studies have established anaplastic lymphoma kinase (ALK), a cell surface receptor
tyrosine kinase, as a tractable molecular target in neuroblastoma. We describe …

Comprehensive mutational profiling of core binding factor acute myeloid leukemia

N Duployez, A Marceau-Renaut… - Blood, The Journal …, 2016 - ashpublications.org
Acute myeloid leukemia (AML) with t (8; 21) or inv (16) have been recognized as unique
entities within AML and are usually reported together as core binding factor AML (CBF …

The evaluation of tools used to predict the impact of missense variants is hindered by two types of circularity

DG Grimm, CA Azencott, F Aicheler, U Gieraths… - Human …, 2015 - Wiley Online Library
Prioritizing missense variants for further experimental investigation is a key challenge in
current sequencing studies for exploring complex and Mendelian diseases. A large number …

A wheat cysteine-rich receptor-like kinase confers broad-spectrum resistance against Septoria tritici blotch

C Saintenac, F Cambon, L Aouini, E Verstappen… - Nature …, 2021 - nature.com
The poverty of disease resistance gene reservoirs limits the breeding of crops for durable
resistance against evolutionary dynamic pathogens. Zymoseptoria tritici which causes …