D'ya like dags? a survey on structure learning and causal discovery

MJ Vowels, NC Camgoz, R Bowden - ACM Computing Surveys, 2022 - dl.acm.org
Causal reasoning is a crucial part of science and human intelligence. In order to discover
causal relationships from data, we need structure discovery methods. We provide a review …

Recent developments in empirical dynamic modelling

SB Munch, TL Rogers… - Methods in Ecology and …, 2023 - Wiley Online Library
Ecosystems are complex and sparsely observed making inference and prediction
challenging. Empirical dynamic modelling (EDM) circumvents the need for a parametric …

Causal networks of phytoplankton diversity and biomass are modulated by environmental context

CW Chang, T Miki, H Ye, S Souissi, R Adrian… - Nature …, 2022 - nature.com
Untangling causal links and feedbacks among biodiversity, ecosystem functioning, and
environmental factors is challenging due to their complex and context-dependent …

Data-driven causal analysis of observational biological time series

AE Yuan, W Shou - Elife, 2022 - elifesciences.org
Complex systems are challenging to understand, especially when they defy manipulative
experiments for practical or ethical reasons. Several fields have developed parallel …

Comparison of six methods for the detection of causality in a bivariate time series

A Krakovská, J Jakubík, M Chvosteková, D Coufal… - Physical Review E, 2018 - APS
In this comparative study, six causality detection methods were compared, namely, the
Granger vector autoregressive test, the extended Granger test, the kernel version of the …

Causal inference from noisy time-series data—Testing the Convergent Cross-Mapping algorithm in the presence of noise and external influence

D Mønster, R Fusaroli, K Tylén, A Roepstorff… - Future Generation …, 2017 - Elsevier
Abstract Convergent Cross-Mapping (CCM) has shown high potential to perform causal
inference in the absence of detailed models. This has implications for the understanding of …

Topological causality in dynamical systems

D Harnack, E Laminski, M Schünemann, KR Pawelzik - Physical review letters, 2017 - APS
Determination of causal relations among observables is of fundamental interest in many
fields dealing with complex systems. Since nonlinear systems generically behave as …

A novel Granger causality method based on HSIC-Lasso for revealing nonlinear relationship between multivariate time series

W Ren, B Li, M Han - Physica A: Statistical Mechanics and its Applications, 2020 - Elsevier
The causality analysis is an important research topic in time series data mining. Granger
causality analysis is a powerful method that determines cause and effect based on …

Convergent cross sorting for estimating dynamic coupling

L Breston, EJ Leonardis, LK Quinn, M Tolston… - Scientific reports, 2021 - nature.com
Natural systems exhibit diverse behavior generated by complex interactions between their
constituent parts. To characterize these interactions, we introduce Convergent Cross Sorting …

Usefulness and limitations of convergent cross sorting and continuity scaling methods for their application in simulated and real-world time series

AD Bahamonde, RM Montes… - Royal Society Open …, 2023 - royalsocietypublishing.org
Causality detection methods are valuable tools for detecting causal links in complex
systems. The efficiency of continuity scaling (CS) and the convergent cross sorting (CSS) …