On the maverick Planctomycetes

S Wiegand, M Jogler, C Jogler - FEMS microbiology reviews, 2018 - academic.oup.com
Planctomycetes are ubiquitous, environmentally and biotechnologically important bacteria
that are key players in global carbon and nitrogen cycles. Ever since their first discovery in …

Microbial biodiversity and bioremediation assessment through omics approaches

H Chandran, M Meena, K Sharma - Frontiers in Environmental …, 2020 - frontiersin.org
Industrialization, population burst, and changing lifestyles have resulted in the genesis of
non-degradable pollutants languishing the environment and human health. Biological …

Anthropogenic and environmental constraints on the microbial methane cycle in coastal sediments

AJ Wallenius, P Dalcin Martins, CP Slomp… - Frontiers in …, 2021 - frontiersin.org
Large amounts of methane, a potent greenhouse gas, are produced in anoxic sediments by
methanogenic archaea. Nonetheless, over 90% of the produced methane is oxidized via …

Metabolic potential of uncultured bacteria and archaea associated with petroleum seepage in deep-sea sediments

X Dong, C Greening, JE Rattray, A Chakraborty… - Nature …, 2019 - nature.com
The lack of microbial genomes and isolates from the deep seabed means that very little is
known about the ecology of this vast habitat. Here, we investigate energy and carbon …

An Arctic natural oil seep investigated from space to the seafloor

G Panieri, C Argentino, SP Ramalho, F Vulcano… - Science of the Total …, 2024 - Elsevier
Due to climate change, decreasing ice cover and increasing industrial activities, Arctic
marine ecosystems are expected to face higher levels of anthropogenic stress. To sustain …

Genomic evidence for sulfur intermediates as new biogeochemical hubs in a model aquatic microbial ecosystem

A Vigneron, P Cruaud, AI Culley, RM Couture… - Microbiome, 2021 - Springer
Background The sulfur cycle encompasses a series of complex aerobic and anaerobic
transformations of S-containing molecules and plays a fundamental role in cellular and …

[HTML][HTML] Anaerobic methane oxidation coupled to denitrification is an important potential methane sink in deep-sea cold seeps

H Jing, R Wang, Q Jiang, Y Zhang, X Peng - Science of the Total …, 2020 - Elsevier
Microbes play a crucial role in mediating the methane flux in deep-sea cold seep
ecosystems, where only methane-related microbes have been well studied, while the whole …

Anaerobic hydrocarbon degradation in candidate phylum 'Atribacteria'(JS1) inferred from genomics

YF Liu, ZZ Qi, LB Shou, JF Liu, SZ Yang, JD Gu… - The ISME …, 2019 - academic.oup.com
The hydrocarbon-enriched environments, such as oil reservoirs and oil sands tailings
ponds, contain a broad diversity of uncultured microorganisms. Despite being one of the few …

Genomic insights into cryptic cycles of microbial hydrocarbon production and degradation in contiguous freshwater and marine microbiomes

A Vigneron, P Cruaud, C Lovejoy, WF Vincent - Microbiome, 2023 - Springer
Background Cyanobacteria and eukaryotic phytoplankton produce long-chain alkanes and
generate around 100 times greater quantities of hydrocarbons in the ocean compared to …

The geology and biogeochemistry of hydrocarbon seeps

SB Joye - Annual review of earth and planetary sciences, 2020 - annualreviews.org
Hydrocarbon seeps, deep sea extreme environments where deeply sourced fluids
discharge at the seabed, occur along continental margins across the globe. Energy-rich …