Soil protists: a fertile frontier in soil biology research

S Geisen, EAD Mitchell, S Adl… - FEMS microbiology …, 2018 - academic.oup.com
Protists include all eukaryotes except plants, fungi and animals. They are an essential, yet
often forgotten, component of the soil microbiome. Method developments have now …

Protist metabarcoding and environmental biomonitoring: time for change

J Pawlowski, F Lejzerowicz… - European Journal of …, 2016 - Elsevier
High-throughput amplicon sequencing of environmental DNA and/or RNA proved to be a
powerful tool to describe protist diversity. This new approach called also the metabarcoding …

Current and future perspectives on the systematics, taxonomy and nomenclature of testate amoebae

A Kosakyan, F Gomaa, E Lara, DJG Lahr - European journal of Protistology, 2016 - Elsevier
Testate amoebae are a polyphyletic assemblage of at least three major, unrelated
taxonomic groups of unicellular amoeboid eukaryotes exhibiting a test. The focus on testate …

Monitoring the dead as an ecosystem indicator

TM Newsome, B Barton, JC Buck… - Ecology and …, 2021 - Wiley Online Library
Dead animal biomass (carrion) is present in all terrestrial ecosystems, and its consumption,
decomposition, and dispersal can have measurable effects on vertebrates, invertebrates …

Phylogenomics and morphological reconstruction of Arcellinida testate amoebae highlight diversity of microbial eukaryotes in the Neoproterozoic

DJG Lahr, A Kosakyan, E Lara, EAD Mitchell, L Morais… - Current Biology, 2019 - cell.com
Life was microbial for the majority of Earth's history, but as very few microbial lineages leave
a fossil record, the Precambrian evolution of life remains shrouded in mystery. Shelled …

Characterizing the postmortem human bone microbiome from surface-decomposed remains

AL Emmons, AZ Mundorff, SW Keenan, J Davoren… - PloS one, 2020 - journals.plos.org
Microbial colonization of bone is an important mechanism of postmortem skeletal
degradation. However, the types and distributions of bone and tooth colonizing microbes are …

Comparative analysis of bones, mites, soil chemistry, nematodes and soil micro-eukaryotes from a suspected homicide to estimate the post-mortem interval

I Szelecz, S Lösch, CVW Seppey, E Lara, D Singer… - Scientific reports, 2018 - nature.com
Criminal investigations of suspected murder cases require estimating the post-mortem
interval (PMI, or time after death) which is challenging for long PMIs. Here we present the …

Checklist, diversity and distribution of testate amoebae in Chile

LD Fernández, E Lara, EAD Mitchell - European Journal of Protistology, 2015 - Elsevier
Bringing together more than 170 years of data, this study represents the first attempt to
construct a species checklist and analyze the diversity and distribution of testate amoebae in …

Spatial impacts of a multi-individual grave on microbial and microfaunal communities and soil biogeochemistry

SW Keenan, AL Emmons, LS Taylor, G Phillips… - PloS one, 2018 - journals.plos.org
Decomposing vertebrates, including humans, result in pronounced changes in surrounding
soil biogeochemistry, particularly nitrogen (N) and carbon (C) availability, and alter soil …

Taxonomic and functional traits responses of Sphagnum peatland testate amoebae to experimentally manipulated water table

I Koenig, M Mulot, EAD Mitchell - Ecological Indicators, 2018 - Elsevier
Biomonitoring tools are useful to assess the impact of environmental changes on the
functioning of ecosystems. Existing tools mostly require species identification, thus allowing …