Decoding aging hallmarks at the single-cell level

S Ma, X Chi, Y Cai, Z Ji, S Wang, J Ren… - Annual Review of …, 2023 - annualreviews.org
Organismal aging exhibits wide-ranging hallmarks in divergent cell types across tissues,
organs, and systems. The advancement of single-cell technologies and generation of rich …

Database resources of the national genomics data center, China national center for bioinformation in 2022

Nucleic Acids Research, 2022 - academic.oup.com
Abstract The National Genomics Data Center (NGDC), part of the China National Center for
Bioinformation (CNCB), provides a family of database resources to support global research …

The 2022 Nucleic Acids Research database issue and the online molecular biology database collection

DJ Rigden, XM Fernández - Nucleic acids research, 2022 - academic.oup.com
Abstract The 2022 Nucleic Acids Research Database Issue contains 185 papers, including
87 papers reporting on new databases and 85 updates from resources previously published …

EWAS Open Platform: integrated data, knowledge and toolkit for epigenome-wide association study

Z Xiong, F Yang, M Li, Y Ma, W Zhao… - Nucleic Acids …, 2022 - academic.oup.com
Abstract Epigenome-Wide Association Study (EWAS) has become a standard strategy to
discover DNA methylation variation of different phenotypes. Since 2018, we have developed …

Epigenetic modifications as therapeutic targets in atherosclerosis: a focus on DNA methylation and non-coding RNAs

H Sum, AC Brewer - Frontiers in Cardiovascular Medicine, 2023 - frontiersin.org
Significant progress in the diagnosis and treatment of cardiovascular disease (CVD) has
been made in the past decade, yet it remains a leading cause of morbidity and mortality …

MethBank 4.0: an updated database of DNA methylation across a variety of species

M Zhang, W Zong, D Zou, G Wang, W Zhao… - Nucleic Acids …, 2023 - academic.oup.com
DNA methylation, as the most intensively studied epigenetic mark, regulates gene
expression in numerous biological processes including development, aging, and disease …

scMMO-atlas: a single cell multimodal omics atlas and portal for exploring fine cell heterogeneity and cell dynamics

W Cheng, C Yin, S Yu, X Chen, N Hong… - Nucleic Acids …, 2025 - academic.oup.com
Single-cell multimodal sequencing parallelly captures multiple modalities of the same cell,
providing unparalleled insights into cell heterogeneity and cell dynamics. For example, joint …

S-nitrosothiol homeostasis maintained by ADH5 facilitates STING-dependent host defense against pathogens

M Jia, L Chai, J Wang, M Wang, D Qin, H Song… - Nature …, 2024 - nature.com
Oxidative (or respiratory) burst confers host defense against pathogens by generating
reactive species, including reactive nitrogen species (RNS). The microbial infection-induced …

Single-cell DNA methylation analysis in cancer

H O'Neill, H Lee, I Gupta, EJ Rodger, A Chatterjee - Cancers, 2022 - mdpi.com
Simple Summary Cancer is a distinctly difficult disease to treat on account of the diverse cell
populations/subpopulations that comprise a tumour. Such cells harbour varying genetic and …

MST4 as a novel therapeutic target for autophagy and radiosensitivity in gastric cancer

X Shi, J Zou, Y Wang, J Zhao, B Ye, Q Qi, F Liu… - IUBMB …, 2023 - Wiley Online Library
Background Mammalian ste20‐like kinase 4 (MST4) and autophagy have been implicated
in ailments such as inflammatory and cancers. Methods In this study, the expression of …