Multispecies coalescent: theory and applications in phylogenetics

S Mirarab, L Nakhleh, T Warnow - Annual Review of Ecology …, 2021 - annualreviews.org
Species tree estimation is a basic part of many biological research projects, ranging from
answering basic evolutionary questions (eg, how did a group of species adapt to their …

Legume phylogeny and classification in the 21st century: progress, prospects and lessons for other species–rich clades

Legume Phylogeny Working Group, A Bruneau… - Taxon, 2013 - Wiley Online Library
The Leguminosae, the third–largest angiosperm family, has a global distribution and high
ecological and economic impor tance. We examine how the legume systematic research …

Plastid phylogenomic insights into relationships of all flowering plant families

HT Li, Y Luo, L Gan, PF Ma, LM Gao, JB Yang, J Cai… - BMC biology, 2021 - Springer
Background Flowering plants (angiosperms) are dominant components of global terrestrial
ecosystems, but phylogenetic relationships at the familial level and above remain only …

Phylotranscriptomic analysis of the origin and early diversification of land plants

NJ Wickett, S Mirarab, N Nguyen… - Proceedings of the …, 2014 - National Acad Sciences
Reconstructing the origin and evolution of land plants and their algal relatives is a
fundamental problem in plant phylogenetics, and is essential for understanding how critical …

The Amborella Genome and the Evolution of Flowering Plants

Amborella Genome Project, VA Albert, WB Barbazuk… - Science, 2013 - science.org
Introduction Darwin famously characterized the rapid rise and early diversification of
flowering plants (angiosperms) in the fossil record as an “abominable mystery.” Identifying …

[图书][B] Modern phylogenetic comparative methods and their application in evolutionary biology: concepts and practice

LZ Garamszegi - 2014 - Springer
Many evolutionary biologists are concerned with the tremendous amount of diversity of
species, and their phenotypes, that we can currently observe in nature, and one of the most …

[图书][B] Phylogeny and Evolution of the Angiosperms

D Soltis, P Soltis, P Endress, M Chase, S Manchester… - 2018 - books.google.com
Although they are relative latecomers on the evolutionary scene, having emerged only 135?
170 million years ago, angiosperms—or flowering plants—are the most diverse and species …

The inference of gene trees with species trees

GJ Szöllősi, E Tannier, V Daubin… - Systematic …, 2015 - academic.oup.com
This article reviews the various models that have been used to describe the relationships
between gene trees and species trees. Molecular phylogeny has focused mainly on …

Chloroplast phylogenomic analyses resolve deep-level relationships of an intractable bamboo tribe Arundinarieae (Poaceae)

PF Ma, YX Zhang, CX Zeng, ZH Guo, DZ Li - Systematic biology, 2014 - academic.oup.com
The temperate woody bamboos constitute a distinct tribe Arundinarieae (Poaceae:
Bambusoideae) with high species diversity. Estimating phylogenetic relationships among …

A timeline for terrestrialization: consequences for the carbon cycle in the Palaeozoic

P Kenrick, CH Wellman… - … Transactions of the …, 2012 - royalsocietypublishing.org
The geochemical carbon cycle is strongly influenced by life on land, principally through the
effects of carbon sequestration and the weathering of calcium and magnesium silicates in …