Regulation of mRNA stability during bacterial stress responses

DA Vargas-Blanco, SS Shell - Frontiers in microbiology, 2020 - frontiersin.org
Bacteria have a remarkable ability to sense environmental changes, swiftly regulating their
transcriptional and posttranscriptional machinery as a response. Under conditions that …

Initiation of mRNA decay in bacteria

S Laalami, L Zig, H Putzer - Cellular and Molecular Life Sciences, 2014 - Springer
The instability of messenger RNA is fundamental to the control of gene expression. In
bacteria, mRNA degradation generally follows an “all-or-none” pattern. This implies that if …

CRISPR-RNAa: targeted activation of translation using dCas13 fusions to translation initiation factors

PB Otoupal, BF Cress, JA Doudna… - Nucleic acids …, 2022 - academic.oup.com
Tools for synthetically controlling gene expression are a cornerstone of genetic engineering.
CRISPRi and CRISPRa technologies have been applied extensively for programmable …

Maturation of polycistronic mRNAs by the endoribonuclease RNase Y and its associated Y-complex in Bacillus subtilis

A DeLoughery, JB Lalanne… - Proceedings of the …, 2018 - National Acad Sciences
Endonucleolytic cleavage within polycistronic mRNAs can lead to differential stability, and
thus discordant abundance, among cotranscribed genes. RNase Y, the major endonuclease …

RNA degradation in Bacillus subtilis: an interplay of essential endo‐ and exoribonucleases

M Lehnik‐Habrink, RJ Lewis, U Mäder… - Molecular …, 2012 - Wiley Online Library
RNA processing and degradation are key processes in the control of transcript accumulation
and thus in the control of gene expression. In Escherichia coli, the underlying mechanisms …

RNase Y of Staphylococcus aureus and its role in the activation of virulence genes

G Marincola, T Schäfer, J Behler… - Molecular …, 2012 - Wiley Online Library
RNase Y of Bacillus subtilis is a key member of the degradosome and important for bulk
mRNA turnover. In contrast to B. subtilis, the RNase Y homologue (rny/cvfA) of …

An RNA-seq based comparative approach reveals the transcriptome-wide interplay between 3′-to-5′ exoRNases and RNase Y

L Broglia, AL Lécrivain, TT Renault, K Hahnke… - Nature …, 2020 - nature.com
RNA degradation is an essential process that allows bacteria to control gene expression
and adapt to various environmental conditions. It is usually initiated by endoribonucleases …

A high-resolution view of RNA endonuclease cleavage in Bacillus subtilis

JC Taggart, J Dierksheide, H LeBlanc, JB Lalanne… - BioRxiv, 2023 - biorxiv.org
ABSTRACT RNA endonucleases are the rate-limiting initiator of decay for many bacterial
mRNAs. However, the positions of cleavage and their sequence determinants remain …

RNA Degradation in Staphylococcus aureus: Diversity of Ribonucleases and Their Impact

RA Bonnin, P Bouloc - International Journal of Genomics, 2015 - Wiley Online Library
The regulation of RNA decay is now widely recognized as having a central role in bacterial
adaption to environmental stress. Here we present an overview on the diversity of …

Bacillus subtilis RNase Y Activity In Vivo Analysed by Tiling Microarrays

S Laalami, P Bessières, A Rocca, L Zig, P Nicolas… - PLoS …, 2013 - journals.plos.org
RNase Y is a key endoribonuclease affecting global mRNA stability in Bacillus subtilis. Its
characterization provided the first evidence that endonucleolytic cleavage plays a major role …