The role of the host—Neutrophil biology

ILC Chapple, J Hirschfeld, A Kantarci… - Periodontology …, 2023 - Wiley Online Library
Neutrophilic polymorphonuclear leukocytes (neutrophils) are myeloid cells packed with
lysosomal granules (hence also called granulocytes) that contain a formidable antimicrobial …

Decoding the genetic and epigenetic basis of asthma

BS Stikker, RW Hendriks, R Stadhouders - Allergy, 2023 - Wiley Online Library
Asthma is a complex and heterogeneous chronic inflammatory disease of the airways.
Alongside environmental factors, asthma susceptibility is strongly influenced by genetics …

Three-dimensional genome organization in immune cell fate and function

S Cuartero, G Stik, R Stadhouders - Nature Reviews Immunology, 2023 - nature.com
Immune cell development and activation demand the precise and coordinated control of
transcriptional programmes. Three-dimensional (3D) organization of the genome has …

A novel neutrophil extracellular trap signature to predict prognosis and immunotherapy response in head and neck squamous cell carcinoma

Q Li, W Chen, Q Li, J Mao, X Chen - Frontiers in Immunology, 2022 - frontiersin.org
Head and neck squamous cell carcinoma (HNSCC) is one of the most common malignant
cancers, and patients with HNSCC possess early metastases and poor prognosis …

Evolutionary gain and loss of a pathological immune response to parasitism

JN Weber, NC Steinel, F Peng, KC Shim, BK Lohman… - Science, 2022 - science.org
Parasites impose fitness costs on their hosts. Biologists often assume that natural selection
favors infection-resistant hosts. Yet, when the immune response itself is costly, theory …

Current understanding of the neutrophil transcriptome in health and disease

LW Garratt - Cells, 2021 - mdpi.com
Neutrophils are key cells of the innate immune system. It is now understood that this
leukocyte population is diverse in both the basal composition and functional plasticity …

Identifying genetic variants associated with chromatin looping and genome function

S Bhattacharyya, F Ay - Nature Communications, 2024 - nature.com
Here we present a comprehensive HiChIP dataset on naïve CD4 T cells (nCD4) from 30
donors and identify QTLs that associate with genotype-dependent and/or allele-specific …

Transcriptional enhancers and their communication with gene promoters

H Ray-Jones, M Spivakov - Cellular and Molecular Life Sciences, 2021 - Springer
Transcriptional enhancers play a key role in the initiation and maintenance of gene
expression programmes, particularly in metazoa. How these elements control their target …

Understanding the evolution of immune genes in jawed vertebrates

M Vinkler, SR Fiddaman, M Těšický… - Journal of …, 2023 - academic.oup.com
Driven by co‐evolution with pathogens, host immunity continuously adapts to optimize
defence against pathogens within a given environment. Recent advances in genetics …

Genetic associations at regulatory phenotypes improve fine-mapping of causal variants for 12 immune-mediated diseases

K Kundu, M Tardaguila, AL Mann, S Watt, H Ponstingl… - Nature …, 2022 - nature.com
The resolution of causal genetic variants informs understanding of disease biology. We used
regulatory quantitative trait loci (QTLs) from the BLUEPRINT, GTEx and eQTLGen projects to …