Metabolic engineering: methodologies and applications

MJ Volk, VG Tran, SI Tan, S Mishra, Z Fatma… - Chemical …, 2022 - ACS Publications
Metabolic engineering aims to improve the production of economically valuable molecules
through the genetic manipulation of microbial metabolism. While the discipline is a little over …

Machine learning in bioprocess development: from promise to practice

LM Helleckes, J Hemmerich, W Wiechert… - Trends in …, 2023 - cell.com
Fostered by novel analytical techniques, digitalization, and automation, modern bioprocess
development provides large amounts of heterogeneous experimental data, containing …

Microbial interactions from a new perspective: reinforcement learning reveals new insights into microbiome evolution

P Ghadermazi, SHJ Chan - Bioinformatics, 2024 - academic.oup.com
Motivation Microbes are essential part of all ecosystems, influencing material flow and
shaping their surroundings. Metabolic modeling has been a useful tool and provided …

Machine learning and deep learning in synthetic biology: Key architectures, applications, and challenges

MK Goshisht - ACS omega, 2024 - ACS Publications
Machine learning (ML), particularly deep learning (DL), has made rapid and substantial
progress in synthetic biology in recent years. Biotechnological applications of biosystems …

Deep learning concepts and applications for synthetic biology

WAV Beardall, GB Stan, MJ Dunlop - GEN biotechnology, 2022 - liebertpub.com
Synthetic biology has a natural synergy with deep learning. It can be used to generate large
data sets to train models, for example by using DNA synthesis, and deep learning models …