Applications of infrared multiple photon dissociation (IRMPD) to the detection of posttranslational modifications

P Maitre, D Scuderi, D Corinti, B Chiavarino… - Chemical …, 2019 - ACS Publications
Infrared multiple photon dissociation (IRMPD) spectroscopy allows for the derivation of the
vibrational fingerprint of molecular ions under tandem mass spectrometry (MS/MS) …

Application of GC/MS soft ionization for isomeric biological compound analysis

T Furuhashi, K Okuda - Critical Reviews in Analytical Chemistry, 2017 - Taylor & Francis
Isomers are compounds with the same molecular formula. Many different types of isomers
are ubiquitous and play important roles in living organisms. Despite their early discovery, the …

Rapid and selective adsorption of a typical aromatic organophosphorus flame retardant on MIL-101-based metal–organic frameworks

H Su, J Lv, L Yang, L Feng, Y Liu, Z Du, L Zhang - RSC Advances, 2020 - pubs.rsc.org
The pollution of aromatic organophosphorus flame retardants (aromatic OPFRs) in aquatic
environments has drawn great attention over the last few years. Two MIL-101-based metal …

IRMPD Spectroscopy of [PC (4:0/4:0) + M]+ (M = H, Na, K) and Corresponding CID Fragment Ions

S Becher, G Berden, J Martens… - Journal of the …, 2021 - ACS Publications
Glycerophospholipids (GPs) are highly abundant in eukaryotic cells and take part in
numerous fundamental physiological processes such as molecular signaling. The GP …

Infrared multiple photon dissociation action spectroscopy of deprotonated DNA mononucleotides: gas-phase conformations and energetics

Y Nei, N Hallowita, JD Steill, J Oomens… - The Journal of …, 2013 - ACS Publications
The gas phase structures of the deprotonated 2′-deoxymononucleotides including 2′-
deoxyadenosine-5′-monophosphate (dA5′ p), 2′-deoxycytidine-5′-monophosphate …

N3 protonation induces base rotation of 2′-deoxyadenosine-5′-monophosphate and adenosine-5′-monophosphate

RR Wu, CC He, LA Hamlow, Y Nei… - The Journal of …, 2016 - ACS Publications
Infrared multiple photon dissociation (IRMPD) action spectroscopy experiments combined
with theoretical calculations are performed to investigate the stable gas-phase …

Structural characterization of nucleotide 5′-triphosphates by infrared ion spectroscopy and theoretical studies

RE Van Outersterp, J Martens, G Berden… - Physical Chemistry …, 2018 - pubs.rsc.org
The molecular family of nucleotide triphosphates (NTPs), with adenosine 5′-triphosphate
(ATP) as its best-known member, is of high biochemical importance as their phosphodiester …

Infrared multiple photon dissociation action spectroscopy of deprotonated RNA mononucleotides: gas-phase conformations and energetics

Y Nei, KT Crampton, G Berden, J Oomens… - The Journal of …, 2013 - ACS Publications
The IRMPD action spectra of the deprotonated forms of the four common RNA
mononucleotides, adenosine-5′-monophosphate (A5′ p), guanosine-5 …

Resonant infrared multiple photon dissociation spectroscopy of anionic nucleotide monophosphate clusters

MR Ligare, AM Rijs, G Berden… - The Journal of …, 2015 - ACS Publications
We report mid-infrared spectra and potential energy surfaces of four anionic, 2′-
deoxynucleotide-5′-monophosphates (dNMPs) and the ionic DNA pairs [dGMP-dCMP–H] …

Undervalued N3 coordination revealed in the cisplatin complex with 2′-deoxyadenosine-5′-monophosphate by a combined IRMPD and theoretical study

B Chiavarino, ME Crestoni, S Fornarini… - Inorganic …, 2017 - ACS Publications
The complex obtained by the reaction of cisplatin and 2′-deoxyadenosine-5′-
monophosphate (5′-dAMP) in water has been isolated and detected by electrospray …