[HTML][HTML] Artificial intelligence in the experimental determination and prediction of macromolecular structures

A Thorn - Current Opinion in Structural Biology, 2022 - Elsevier
Abstract Machine learning methods, in particular convolutional neural networks, have been
applied to a variety of problems in cryo-EM and macromolecular crystallographic structure …

Caught between a ROCK and a hard place: current challenges in structure-based drug design

D Pala, DE Clark - Drug Discovery Today, 2024 - Elsevier
The discipline of structure-based drug design (SBDD) is several decades old and it is
tempting to think that the proliferation of experimental structures for many drug targets might …

Deep-learning map segmentation for protein X-ray crystallographic structure determination

P Skubák - Biological Crystallography, 2024 - journals.iucr.org
When solving a structure of a protein from single-wavelength anomalous diffraction X-ray
data, the initial phases obtained by phasing from an anomalously scattering substructure …

[PDF][PDF] Deep learning applications in protein crystallography

S Matinyan, P Filipcik, JP Abrahams - … Crystallographica Section A …, 2024 - journals.iucr.org
Deep learning techniques can recognize complex patterns in noisy, multidimensional data.
In recent years, researchers have started to explore the potential of deep learning in the field …

Developing Artificial Intelligence Tools for Biologists

L Shub - 2024 - escholarship.org
With the growth of biological and chemical datasets and the development of novel
computational techniques, applications of artificial intelligence (AI) and machine learning …

EXPLOITING MOLECULAR TARGETING IN ANTICANCER CHEMOTHERAPY: IN SILICO STUDIES TO IDENTIFY NOVEL MOLECULES TARGETING KINASES IN …

V Marcellini - 2023 - usiena-air.unisi.it
In recent years, a convergence of scientific progress has allowed to identify specific
molecular targets and signaling routes for cancer cells, leading to more selective, more …

Modeling of Chemical Reactions and Protein Structure Refinement Using Machine Learning

KD Ranasinghe - 2022 - search.proquest.com
Productive collaboration between experimentalists and theorists has been a growing trend,
where establishing a proper computational description assists in solving many chemical …

深層学習を用いたタンパク質立体構造データの精緻化

佐藤美和, 宮口郁子 - 生物工学会誌, 2022 - jstage.jst.go.jp
類ごと (C, O, N, S) に座標を分割した. CNN の画像データの場合, 三原色 (青, 赤, 黄)
のチャネルがあり, 多彩な色を表現していることと同様の仕組みを利用できると考えたからである. 3 …