Base composition and host adaptation of the SARS-CoV-2: insight from the codon usage perspective

A Roy, F Guo, B Singh, S Gupta, K Paul… - Frontiers in …, 2021 - frontiersin.org
The novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has been
spreading rapidly all over the world and has raised grave concern globally. The present …

Characterization of the SARS-CoV-2 genomes in Egypt in first and second waves of infection

ARN Zekri, AA Bahnasy, MM Hafez, ZK Hassan… - Scientific Reports, 2021 - nature.com
Abstract At Wuhan, in December 2019, the SRAS-CoV-2 outbreak was detected and it has
been the pandemic worldwide. This study aims to investigate the mutations in sequence of …

Comprehensive analysis of codon usage pattern in Eisenia fetida and its correlation with gene expression

M Hassan, JMH Anal, R Singh - Biocatalysis and Agricultural Biotechnology, 2023 - Elsevier
Every individual gene or genome follows the phenomenon of codon bias, where the usage
among synonymous codons is not equal. The present study was conducted to understand …

Codon usage and context analysis of genes modulated during SARS-CoV-2 infection and dental inflammation

R Khandia, MK Pandey, AA Khan, IV Rzhepakovsky… - Vaccines, 2022 - mdpi.com
The overexpression of SARS-CoV-2 primary receptors and co-receptors (ACE2, TMPRSS2,
FURIN, and CD147) enhance the likeliness of SARS-CoV-2 infection. The genes for same …

Adaption of tobacco rattle virus to its solanaceous hosts is related to the codon usage bias of the hosts and that of the viral 16 K gene

Q Lin, Y Zheng, Y Yin, Y Chen, M Li, H Zheng… - European Journal of …, 2023 - Springer
Tobacco rattle virus (TRV) is a member of the genus Tobravirus, family Virgaviridae, that
infects many different plants from 50 families. TRV-based VIGS vectors are widely used in …

Induction of concurrent pulmonary immune modulation and regeneration by protein mediated conjugation of immune regulatory cells with endogenous progenitor …

TE Ichim, F Ramos, J Veltmeyer… - US Patent App. 17 …, 2023 - Google Patents
Disclosed are means, methods and compositions of matter useful for treatment of
inflammatory pulmonary diseases such as COVID-19 through administration of agents that …

Treatment of covid-19 associated cognitive dysfunction by nutraceutical preparations

T Ichim, TG Dixon - US Patent App. 18/106,925, 2023 - Google Patents
Disclosed are means and methods of treating cognitive dysfunction associated with COVID-
19 and/or other associated with inflammatory conditions. In one embodiment treatment of …

Regenerative cell therapy for viral induced sexual dysfunction

T Ichim, A Patel, T Warbington - US Patent App. 18/082,907, 2023 - Google Patents
The invention provides means, methods, and compositions of matter useful for treatment of
viral induced sexual dysfunction. In one embodiment the invention teaches the use of …

Ivermectin compositions for treatment of covid-19

TE Ichim, F Ramos, J Veltmeyer, TG Dixon… - US Patent App. 17 …, 2023 - Google Patents
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THERAPEUTIC SOLUTIONS INTERNATIONAL, INC. ASSIGNMENT OF ASSIGNORS …