[HTML][HTML] The CRISPR-Cas toolbox and gene editing technologies

G Liu, Q Lin, S Jin, C Gao - Molecular cell, 2022 - cell.com
The emergence of CRISPR-Cas systems has accelerated the development of gene editing
technologies, which are widely used in the life sciences. To improve the performance of …

Mechanism, cellular functions and cancer roles of polymerase-theta-mediated DNA end joining

DA Ramsden, J Carvajal-Garcia… - Nature reviews Molecular …, 2022 - nature.com
Cellular pathways that repair chromosomal double-strand breaks (DSBs) have pivotal roles
in cell growth, development and cancer. These DSB repair pathways have been the target of …

Expanding the CRISPR toolbox in zebrafish for studying development and disease

K Liu, C Petree, T Requena, P Varshney… - Frontiers in cell and …, 2019 - frontiersin.org
The study of model organisms has revolutionized our understanding of the mechanisms
underlying normal development, adult homeostasis, and human disease. Much of what we …

Microhomologies are prevalent at Cas9-induced larger deletions

DDG Owens, A Caulder, V Frontera… - Nucleic acids …, 2019 - academic.oup.com
The CRISPR system is widely used in genome editing for biomedical research. Here, using
either dual paired Cas9D10A nickases or paired Cas9 nuclease we characterize …

Current bioinformatics tools to optimize CRISPR/Cas9 experiments to reduce off-target effects

M Naeem, OS Alkhnbashi - International Journal of Molecular Sciences, 2023 - mdpi.com
The CRISPR-Cas system has evolved into a cutting-edge technology that has transformed
the field of biological sciences through precise genetic manipulation. CRISPR/Cas9 …

[HTML][HTML] SYNCAS: Efficient CRISPR/Cas9 gene-editing in difficult to transform arthropods

S De Rouck, A Mocchetti, W Dermauw… - Insect Biochemistry and …, 2024 - Elsevier
The genome editing technique CRISPR/Cas9 has led to major advancements in many
research fields and this state-of-the-art tool has proven its use in genetic studies for various …

Optimization of multiplexed CRISPR/Cas9 system for highly efficient genome editing in Setaria viridis

T Weiss, C Wang, X Kang, H Zhao… - The Plant …, 2020 - Wiley Online Library
In recent years, Setaria viridis has been developed as a model plant to better understand the
C4 photosynthetic pathway in major crops. With the increasing availability of genomic …

Maximizing CRISPR/Cas9 phenotype penetrance applying predictive modeling of editing outcomes in Xenopus and zebrafish embryos

T Naert, D Tulkens, NA Edwards, M Carron… - Scientific reports, 2020 - nature.com
CRISPR/Cas9 genome editing has revolutionized functional genomics in vertebrates.
However, CRISPR/Cas9 edited F0 animals too often demonstrate variable phenotypic …

1-phenyl 2-thiourea (PTU) activates autophagy in zebrafish embryos

XK Chen, JSK Kwan, RCC Chang, ACH Ma - Autophagy, 2021 - Taylor & Francis
phenyl 2-thiourea (PTU) is a Tyr (tyrosinase) inhibitor that is extensively used to block
pigmentation and improve optical transparency in zebrafish (Danio rerio) embryo. Here, we …

CRISPR/Cas‐based precision genome editing via microhomology‐mediated end joining

T Van Vu, D Thi Hai Doan, J Kim… - Plant Biotechnology …, 2021 - Wiley Online Library
Gene editing and/or allele introgression with absolute precision and control appear to be the
ultimate goals of genetic engineering. Precision genome editing in plants has been …