Phylogeny of the Genus Drosophila

PM O'Grady, R DeSalle - Genetics, 2018 - academic.oup.com
Understanding phylogenetic relationships among taxa is key to designing and implementing
comparative analyses. The genus Drosophila, which contains over 1600 species, is one of …

Genetics on the Fly: A Primer on the Drosophila Model System

KG Hales, CA Korey, AM Larracuente, DM Roberts - Genetics, 2015 - academic.oup.com
Fruit flies of the genus Drosophila have been an attractive and effective genetic model
organism since Thomas Hunt Morgan and colleagues made seminal discoveries with them …

Helitrons shaping the genomic architecture of Drosophila: enrichment of DINE-TR1 in α- and β-heterochromatin, satellite DNA emergence, and piRNA expression

GB Dias, P Heringer, M Svartman, GCS Kuhn - Chromosome Research, 2015 - Springer
Abstract Drosophila INterspersed Elements (DINEs) constitute an abundant but poorly
understood group of Helitrons present in several Drosophila species. The general structure …

Phylogenomic analyses of the genus Drosophila reveals genomic signals of climate adaptation

F Li, RV Rane, V Luria, Z Xiong, J Chen… - Molecular Ecology …, 2022 - Wiley Online Library
Many Drosophila species differ widely in their distributions and climate niches, making them
excellent subjects for evolutionary genomic studies. Here, we have developed a database of …

Genomics of Ecological Adaptation in Cactophilic Drosophila

Y Guillén, N Rius, A Delprat, A Williford… - Genome biology and …, 2015 - academic.oup.com
Cactophilic Drosophila species provide a valuable model to study gene–environment
interactions and ecological adaptation. Drosophila buzzatii and Drosophila mojavensis are …

High-Quality Genome Assemblies Reveal Evolutionary Dynamics of Repetitive DNA and Structural Rearrangements in the Drosophila virilis Subgroup

JM Flynn, YH Ahmed-Braimah, M Long… - Genome biology and …, 2024 - academic.oup.com
High-quality genome assemblies across a range of nontraditional model organisms can
accelerate the discovery of novel aspects of genome evolution. The Drosophila virilis group …

Divergence and introgression among the virilis group of Drosophila

LH Yusuf, V Tyukmaeva, A Hoikkala… - Evolution …, 2022 - academic.oup.com
Speciation with gene flow is now widely regarded as common. However, the frequency of
introgression between recently diverged species and the evolutionary consequences of …

Tetris Is a Foldback Transposon that Provided the Building Blocks for an Emerging Satellite DNA of Drosophila virilis

GB Dias, M Svartman, A Delprat, A Ruiz… - Genome biology and …, 2014 - academic.oup.com
Transposable elements (TEs) and satellite DNAs (satDNAs) are abundant components of
most eukaryotic genomes studied so far and their impact on evolution has been the focus of …

De novo identification of satellite DNAs in the sequenced genomes of Drosophila virilis and D. americana using the RepeatExplorer and TAREAN pipelines

BSML Silva, P Heringer, GB Dias, M Svartman… - PLoS …, 2019 - journals.plos.org
Satellite DNAs are among the most abundant repetitive DNAs found in eukaryote genomes,
where they participate in a variety of biological roles, from being components of important …

Origin and Consequences of Chromosomal Inversions in the virilis Group of Drosophila

M Reis, CP Vieira, R Lata, N Posnien… - Genome Biology and …, 2018 - academic.oup.com
In Drosophila, large variations in rearrangement rate have been reported among different
lineages and among Muller's elements. Nevertheless, the mechanisms that are involved in …