Taking the leap between analytical chemistry and artificial intelligence: A tutorial review

LB Ayres, FJV Gomez, JR Linton, MF Silva… - Analytica Chimica …, 2021 - Elsevier
The last 10 years have witnessed the growth of artificial intelligence into different research
areas, emerging as a vibrant discipline with the capacity to process large amounts of …

A review on artificial intelligence enabled design, synthesis, and process optimization of chemical products for industry 4.0

C He, C Zhang, T Bian, K Jiao, W Su, KJ Wu, A Su - Processes, 2023 - mdpi.com
With the development of Industry 4.0, artificial intelligence (AI) is gaining increasing attention
for its performance in solving particularly complex problems in industrial chemistry and …

Large-scale chemical language representations capture molecular structure and properties

J Ross, B Belgodere, V Chenthamarakshan… - Nature Machine …, 2022 - nature.com
Abstract Models based on machine learning can enable accurate and fast molecular
property predictions, which is of interest in drug discovery and material design. Various …

MolGpka: A Web Server for Small Molecule pKa Prediction Using a Graph-Convolutional Neural Network

X Pan, H Wang, C Li, JZH Zhang… - Journal of Chemical …, 2021 - ACS Publications
p K a is an important property in the lead optimization process since the charge state of a
molecule in physiologic pH plays a critical role in its biological activity, solubility, membrane …

AMDE: a novel attention-mechanism-based multidimensional feature encoder for drug–drug interaction prediction

S Pang, Y Zhang, T Song, X Zhang… - Briefings in …, 2022 - academic.oup.com
The properties of the drug may be altered by the combination, which may cause unexpected
drug–drug interactions (DDIs). Prediction of DDIs provides combination strategies of drugs …

Predicting polymers' glass transition temperature by a chemical language processing model

G Chen, L Tao, Y Li - Polymers, 2021 - mdpi.com
We propose a chemical language processing model to predict polymers' glass transition
temperature (T g) through a polymer language (SMILES, Simplified Molecular Input Line …

Application of message passing neural networks for molecular property prediction

M Tang, B Li, H Chen - Current Opinion in Structural Biology, 2023 - Elsevier
Accurate molecular property prediction, as one of the classical cheminformatics topics, plays
a prominent role in the fields of computer-aided drug design. For instance, property …

Machine learning and deep learning in data-driven decision making of drug discovery and challenges in high-quality data acquisition in the pharmaceutical industry

SA Kumar, TD Ananda Kumar… - Future Medicinal …, 2022 - Taylor & Francis
Predicting novel small molecule bioactivities for the target deconvolution, hit-to-lead
optimization in drug discovery research, requires molecular representation. Previous reports …

D3CARP: a comprehensive platform with multiple-conformation based docking, ligand similarity search and deep learning approaches for target prediction and virtual …

Y Shi, X Zhang, Y Yang, T Cai, C Peng, L Wu… - Computers in Biology …, 2023 - Elsevier
Resource-and time-consuming biological experiments are unavoidable in traditional drug
discovery, which have directly driven the evolution of various computational algorithms and …

Accurate physical property predictions via deep learning

Y Hou, S Wang, B Bai, HCS Chan, S Yuan - Molecules, 2022 - mdpi.com
Neural networks and deep learning have been successfully applied to tackle problems in
drug discovery with increasing accuracy over time. There are still many challenges and …