RNA crystal structures have provided a wealth of information on localized metal ions that are bound to specific sites, such as the RNA deep groove, the Hoogsteen face of guanine …
H Yang, F Jossinet, N Leontis, L Chen… - Nucleic acids …, 2003 - academic.oup.com
Three programs have been developed to aid in the classification and visualization of RNA structure. BPViewer provides a web interface for displaying three-dimensional (3D) …
All large structured RNAs contain hairpin motifs made of a stem closed by several looped nucleotides. The most frequent loop motif is the UUCG one. This motif belongs to the …
The tRNA anticodon loops always comprise seven nucleotides and is involved in many recognition processes with proteins and RNA fragments. We have investigated the nature …
In addition to the canonical base-pairs comprising the standard Watson–Crick (C: G and U: A) and wobble U: G conformations, an analysis of the base-pair types and conformations in …
M Szymański, MZ BARCISZEWSKA… - Biochemical …, 2003 - portlandpress.com
5S rRNA is an integral component of the large ribosomal subunit in all known organisms. Despite many years of intensive study, the function of 5S rRNA in the ribosome remains …
PJ Nichols, MA Henen, A Born, D Strotz… - Communications …, 2018 - nature.com
RNA not only translates the genetic code into proteins, but also carries out important cellular functions. Understanding such functions requires knowledge of the structure and dynamics …
M Menger, F Eckstein, D Porschke - Biochemistry, 2000 - ACS Publications
The dynamics of RNA hairpin tetraloops of the GNRA type [sequence G-any ribonucleotide (N)-purine (R)-A] was analyzed by fluorescence spectroscopy and by fluorescence-detected …
This paper presents the updated version (Y2K) of the database of ribosomal 5S ribonucleic acids (5S rRNA) and their genes (5S rDNA), http://rose. man/poznan. pl/5SData/index. html …