The neglected roles of adjacent natural ecosystems in maintaining bacterial diversity in agroecosystems

Z Peng, Y Yang, Y Liu, L Bu, J Qi, H Gao… - Global Change …, 2024 - Wiley Online Library
A central aim of community ecology is to understand how local species diversity is shaped.
Agricultural activities are reshaping and filtering soil biodiversity and communities; however …

Estimating probabilistic site‐specific species pools and dark diversity from co‐occurrence data

CP Carmona, M Pärtel - Global Ecology and Biogeography, 2021 - Wiley Online Library
Aim The species pool specific for a site includes all species from the region that are
theoretically able to live in the site's particular ecological conditions. The absent portion of …

Decomposing dark diversity affinities of species and sites using Bayesian method: What accounts for absences of species at suitable sites?

J Fujinuma, M Pärtel - Methods in Ecology and Evolution, 2023 - Wiley Online Library
Locally observed biodiversity always consists of only a fraction of its site‐specific species
pool. Why some suitable species are absent, shaping dark diversity of that site, is a basic yet …

The influence of landscape characteristics on breeding bird dark diversity

AH Andersen, KK Clausen, S Normand, T Vikstrøm… - Oecologia, 2023 - Springer
The exploration of factors and processes affecting biodiversity loss is central to nature
management and wildlife conservation, but only recently has knowledge about the absence …

Community completeness as a measure of restoration success: multiple-study comparisons across ecosystems and ecological groups

N Noreika, M Pärtel, E Öckinger - Biodiversity and Conservation, 2020 - Springer
When restoring habitat for biodiversity, the most effective outcome will be achieved by
restoration projects which target several organism groups or ecosystem types. Such …

Deriving site‐specific species pools from large databases

H Bruelheide, B Jiménez‐Alfaro, U Jandt… - Ecography, 2020 - Wiley Online Library
Defining the species pool of a community is crucial for many types of ecological analyses,
providing a foundation to metacommunity, null modelling or dark diversity frameworks. It is a …

Temporal lags in observed and dark diversity in the Anthropocene

DPF Trindade, CP Carmona, M Pärtel - Global Change Biology, 2020 - Wiley Online Library
Understanding biodiversity changes in the Anthropocene (eg due to climate and land‐use
change) is an urgent ecological issue. This important task is challenging because global …

Integrating species pools and abundance distribution in habitat conservation status assessment: A new index

V Jung, L Morel, S Bonthoux, S Chollet - Ecological Indicators, 2021 - Elsevier
Habitat degradation and fragmentation are recognized as major causes of biodiversity loss,
and effective management to conserve habitats is highly dependent on our ability to assess …

Dark diversity in Amazonian stream fish communities: What factors determine species absence along environmental gradients?

LG Cantanhêde, FB Teresa, DJ Hoeinghaus… - Freshwater …, 2023 - Wiley Online Library
Species distribution models often fail to predict observed patterns of species diversity, and
this is because some species within a regional pool that are tolerant of conditions at a given …

DarkDivNet–A global research collaboration to explore the dark diversity of plant communities

M Pärtel, CP Carmona, M Zobel… - Journal of …, 2019 - Wiley Online Library
DarkDivNet is a global research collaboration which explores dark diversity—the set of
species that are absent from a site despite being suitable under the site conditions and …