Transcriptional elongation control in developmental gene expression, aging, and disease

Y Aoi, A Shilatifard - Molecular cell, 2023 - cell.com
The elongation stage of transcription by RNA polymerase II (RNA Pol II) is central to the
regulation of gene expression in response to developmental and environmental cues in …

Chromatin and transcription in yeast

OJ Rando, F Winston - Genetics, 2012 - academic.oup.com
Understanding the mechanisms by which chromatin structure controls eukaryotic
transcription has been an intense area of investigation for the past 25 years. Many of the key …

Structural basis of nucleosome disassembly and reassembly by RNAPII elongation complex with FACT

H Ehara, T Kujirai, M Shirouzu, H Kurumizaka… - Science, 2022 - science.org
During gene transcription, RNA polymerase II (RNAPII) traverses nucleosomes in chromatin,
but the mechanism has remained elusive. Using cryo–electron microscopy, we obtained …

A ubiquitous disordered protein interaction module orchestrates transcription elongation

K Cermakova, J Demeulemeester, V Lux, M Nedomova… - Science, 2021 - science.org
During eukaryotic transcription elongation, RNA polymerase II (RNAP2) is regulated by a
chorus of factors. Here, we identified a common binary interaction module consisting of TFIIS …

SETD2: from chromatin modifier to multipronged regulator of the genome and beyond

TM Molenaar, F van Leeuwen - Cellular and Molecular Life Sciences, 2022 - Springer
Histone modifying enzymes play critical roles in many key cellular processes and are
appealing proteins for targeting by small molecules in disease. However, while the functions …

The Mediator complex in plants: structure, phylogeny, and expression profiling of representative genes in a dicot (Arabidopsis) and a monocot (rice) during …

S Mathur, S Vyas, S Kapoor, AK Tyagi - Plant physiology, 2011 - academic.oup.com
Abstract The Mediator (Med) complex relays regulatory information from DNA-bound
transcription factors to the RNA polymerase II in eukaryotes. This macromolecular unit is …

The Mediator complex and transcription elongation

RC Conaway, JW Conaway - Biochimica Et Biophysica Acta (BBA)-Gene …, 2013 - Elsevier
BACKGROUND: Mediator is an evolutionarily conserved multisubunit RNA polymerase II
(Pol II) coregulatory complex. Although Mediator was initially found to play a critical role in …

Deciphering correct strategies for multiprotein complex assembly by co-expression: application to complexes as large as the histone octamer

ML Diebold, S Fribourg, M Koch, T Metzger… - Journal of structural …, 2011 - Elsevier
Macromolecular complexes are responsible for most of the essential mechanisms in cells,
leading to a broad interest in their purification and characterization. Co-expression is now …

Spt6 directly interacts with Cdc73 and is required for Paf1 complex occupancy at active genes in Saccharomyces cerevisiae

MA Ellison, S Namjilsuren, MK Shirra… - Nucleic Acids …, 2023 - academic.oup.com
Abstract The Paf1 complex (Paf1C) is a conserved transcription elongation factor that
regulates transcription elongation efficiency, facilitates co-transcriptional histone …

Insights into Spt6: a histone chaperone that functions in transcription, DNA replication, and genome stability

CLW Miller, JL Warner, F Winston - Trends in Genetics, 2023 - cell.com
Transcription elongation requires elaborate coordination between the transcriptional
machinery and chromatin regulatory factors to successfully produce RNA while preserving …