The technological landscape and applications of single-cell multi-omics

A Baysoy, Z Bai, R Satija, R Fan - Nature Reviews Molecular Cell …, 2023 - nature.com
Single-cell multi-omics technologies and methods characterize cell states and activities by
simultaneously integrating various single-modality omics methods that profile the …

Immunology of human fibrosis

M Bhattacharya, P Ramachandran - Nature Immunology, 2023 - nature.com
Fibrosis, defined by the excess deposition of structural and matricellular proteins in the
extracellular space, underlies tissue dysfunction in multiple chronic diseases. Approved …

Spatially resolved multiomics of human cardiac niches

K Kanemaru, J Cranley, D Muraro, AMA Miranda… - Nature, 2023 - nature.com
The function of a cell is defined by its intrinsic characteristics and its niche: the tissue
microenvironment in which it dwells. Here we combine single-cell and spatial …

The heterocellular heart: identities, interactions, and implications for cardiology

A Lother, P Kohl - Basic Research in Cardiology, 2023 - Springer
The heterocellular nature of the heart has been receiving increasing attention in recent
years. In addition to cardiomyocytes as the prototypical cell type of the heart, non-myocytes …

Notch-mediated cellular interactions between vascular cells

H Cuervo, S Mühleder, I García-Gónzalez… - Current Opinion in Cell …, 2023 - Elsevier
Vessel formation and differentiation to a proper hierarchical vasculature requires a
coordinated effort from endothelial and mural cells. Over the last decade Notch was …

STellaris: a web server for accurate spatial mapping of single cells based on spatial transcriptomics data

X Li, C Xiao, J Qi, W Xue, X Xu, Z Mu… - Nucleic acids …, 2023 - academic.oup.com
Single-cell RNA sequencing (scRNA-seq) provides insights into gene expression
heterogeneities in diverse cell types underlying homeostasis, development and pathological …

Phenomics and robust multiomics data for cardiovascular disease subtyping

E Maiorino, J Loscalzo - Arteriosclerosis, Thrombosis, and …, 2023 - Am Heart Assoc
The complex landscape of cardiovascular diseases encompasses a wide range of related
pathologies arising from diverse molecular mechanisms and exhibiting heterogeneous …

Plasma fibroblast activation protein is decreased in acute heart failure despite cardiac tissue upregulation

M Delgado-Arija, P Genovés, L Pérez-Carrillo… - Journal of Translational …, 2024 - Springer
Background Cardiac fibroblast activation protein (FAP) has an emerging role in heart failure
(HF). A paradoxical reduction in its levels in pathological conditions associated with acute …

Integration mapping of cardiac fibroblast single-cell transcriptomes elucidates cellular principles of fibrosis in diverse pathologies

R Patrick, V Janbandhu, V Tallapragada, SSM Tan… - Science …, 2024 - science.org
Single-cell technology has allowed researchers to probe tissue complexity and dynamics at
unprecedented depth in health and disease. However, the generation of high-dimensionality …

CardiOmics signatures reveal therapeutically actionable targets and drugs for cardiovascular diseases

MJ Ramos-Medina, G Echeverría-Garcés… - Heliyon, 2024 - cell.com
Cardiovascular diseases are the leading cause of death worldwide, with heart failure being
a complex condition that affects millions of individuals. Single-nucleus RNA sequencing has …