MA Coomer, L Ham, MPH Stumpf - Cell Systems, 2022 - cell.com
The Waddington epigenetic landscape has become an iconic representation of the cellular differentiation process. Recent single-cell transcriptomic data provide new opportunities for …
In cells, genes are transcribed into mRNAs, and the latter are translated into proteins. Due to the feedbacks between these processes, the kinetics of gene expression may be complex …
Random fluctuations in gene expression lead to wide cell-to-cell differences in RNA and protein counts. Most efforts to understand stochastic gene expression focus on local …
Y Xu, J Feng, JJ Li, H Zhang - Chaos: An Interdisciplinary Journal of …, 2013 - pubs.aip.org
The study of random fluctuations in a gene transcriptional regulatory system is extended to the case of non-Gaussian Lévy noise, which can describe unpredictable jump changes of …
Starting with a stochastic differential equation driven by combined Gaussian and Lévy noise terms we determine the associated fractional Fokker–Planck–Kolmogorov equation …
We survey work that has been carried out in the attempts of biomathematicians to understand the dynamic behavior of simple bacterial operons starting with the initial work of …
MS Sherman, BA Cohen - PLoS computational biology, 2014 - journals.plos.org
Stochastic fluctuations in gene expression give rise to distributions of protein levels across cell populations. Despite a mounting number of theoretical models explaining stochasticity …
Background Although genome-wide transcriptional analysis has been used for many years to study bacterial gene expression, many aspects of the bacterial transcriptome remain …
This paper considers adiabatic reduction in a model of stochastic gene expression with bursting transcription considered as a jump Markov process. In this model, the process of …