Advances in viroid-host interactions

B Navarro, R Flores, F Di Serio - Annual Review of Virology, 2021 - annualreviews.org
Viroids are small, single-stranded, circular RNAs infecting plants. Composed of only a few
hundred nucleotides and being unable to code for proteins, viroids represent the lowest …

Historical perspective, development and applications of next-generation sequencing in plant virology

M Barba, H Czosnek, A Hadidi - Viruses, 2014 - mdpi.com
Next-generation high throughput sequencing technologies became available at the onset of
the 21st century. They provide a highly efficient, rapid, and low cost DNA sequencing …

The Arabidopsis miR472-RDR6 Silencing Pathway Modulates PAMP- and Effector-Triggered Immunity through the Post-transcriptional Control of Disease Resistance …

M Boccara, A Sarazin, O Thiebeauld, F Jay… - PLoS …, 2014 - journals.plos.org
RNA-DEPENDENT RNA POLYMERASE 6 (RDR6) is a key RNA silencing factor initially
characterized in transgene silencing and virus resistance. This enzyme also contributes to …

Suppression of RNA Silencing by a Plant DNA Virus Satellite Requires a Host Calmodulin-Like Protein to Repress RDR6 Expression

F Li, C Huang, Z Li, X Zhou - PLoS pathogens, 2014 - journals.plos.org
In plants, RNA silencing plays a key role in antiviral defense. To counteract host defense,
plant viruses encode viral suppressors of RNA silencing (VSRs) that target different effector …

Next-generation sequencing and genome editing in plant virology

A Hadidi, R Flores, T Candresse, M Barba - Frontiers in microbiology, 2016 - frontiersin.org
Next-generation sequencing (NGS) has been applied to plant virology since 2009. NGS
provides highly efficient, rapid, low cost DNA, or RNA high-throughput sequencing of the …

Small RNAs containing the pathogenic determinant of a chloroplast‐replicating viroid guide the degradation of a host mRNA as predicted by RNA silencing

B Navarro, A Gisel, ME Rodio, S Delgado… - The Plant …, 2012 - Wiley Online Library
How viroids, tiny non‐protein‐coding RNAs (∼ 250–400 nt), incite disease is unclear. One
hypothesis is that viroid‐derived small RNAs (vd‐sRNAs; 21–24 nt) resulting from the host …

Discovery of replicating circular RNAs by RNA-seq and computational algorithms

Z Zhang, S Qi, N Tang, X Zhang, S Chen, P Zhu… - PLoS …, 2014 - journals.plos.org
Replicating circular RNAs are independent plant pathogens known as viroids, or act to
modulate the pathogenesis of plant and animal viruses as their satellite RNAs. The rate of …

Small RNA-omics for plant virus identification, virome reconstruction, and antiviral defense characterization

MM Pooggin - Frontiers in microbiology, 2018 - frontiersin.org
RNA interference (RNAi)-based antiviral defense generates small interfering RNAs that
represent the entire genome sequences of both RNA and DNA viruses as well as viroids …

[HTML][HTML] Molecular biology of viroid–host interactions and disease control strategies

N Kovalskaya, RW Hammond - Plant Science, 2014 - Elsevier
Viroids are single-stranded, covalently closed, circular, highly structured noncoding RNAs
that cause disease in several economically important crop plants. They replicate …

Current overview on viroid–host interactions

CR Adkar‐Purushothama… - Wiley Interdisciplinary …, 2020 - Wiley Online Library
Viroids are one of the most enigmatic highly structured, circular, single‐stranded RNA
phytopathogens. Although they are not known to code for any peptide, viroids induce visible …