Enhancing the accuracy of next-generation sequencing for detecting rare and subclonal mutations

JJ Salk, MW Schmitt, LA Loeb - Nature Reviews Genetics, 2018 - nature.com
Mutations, the fuel of evolution, are first manifested as rare DNA changes within a population
of cells. Although next-generation sequencing (NGS) technologies have revolutionized the …

On the origin of cancer metastasis

TN Seyfried, LC Huysentruyt - Critical Reviews™ in …, 2013 - dl.begellhouse.com
Metastasis involves the spread of cancer cells from the primary tumor to surrounding tissues
and to distant organs and is the primary cause of cancer morbidity and mortality. In order to …

[HTML][HTML] Epigenetic drivers of tumourigenesis and cancer metastasis

A Chatterjee, EJ Rodger, MR Eccles - Seminars in cancer biology, 2018 - Elsevier
Since the completion of the first human genome sequence and the advent of next generation
sequencing technologies, remarkable progress has been made in understanding the …

Hallmarks of cancer: the next generation

D Hanahan, RA Weinberg - cell, 2011 - cell.com
The hallmarks of cancer comprise six biological capabilities acquired during the multistep
development of human tumors. The hallmarks constitute an organizing principle for …

Anti-inflammatory action of green tea

T Ohishi, S Goto, P Monira, M Isemura… - Anti-Inflammatory & …, 2016 - ingentaconnect.com
Background: Green tea has been shown to have beneficial effects against a variety of
diseases such as cancer, obesity, diabetes, cardiovascular disease, and neurodegenerative …

Cancer as a metabolic disease: implications for novel therapeutics

TN Seyfried, RE Flores, AM Poff… - …, 2014 - academic.oup.com
Emerging evidence indicates that cancer is primarily a metabolic disease involving
disturbances in energy production through respiration and fermentation. The genomic …

PKM2 isoform-specific deletion reveals a differential requirement for pyruvate kinase in tumor cells

WJ Israelsen, TL Dayton, SM Davidson, BP Fiske… - Cell, 2013 - cell.com
The pyruvate kinase M2 isoform (PKM2) is expressed in cancer and plays a role in
regulating anabolic metabolism. To determine whether PKM2 is required for tumor formation …

Cancer evolution: mathematical models and computational inference

N Beerenwinkel, RF Schwarz, M Gerstung… - Systematic …, 2015 - academic.oup.com
Cancer is a somatic evolutionary process characterized by the accumulation of mutations,
which contribute to tumor growth, clinical progression, immune escape, and drug resistance …

Cancer stem cell hierarchy in glioblastoma multiforme

A Bradshaw, A Wickremsekera, ST Tan, L Peng… - Frontiers in …, 2016 - frontiersin.org
Glioblastoma multiforme (GBM), an aggressive tumor that typically exhibits treatment failure
with high mortality rates, is associated with the presence of cancer stem cells (CSCs) within …

Ultra-sensitive sequencing reveals an age-related increase in somatic mitochondrial mutations that are inconsistent with oxidative damage

SR Kennedy, JJ Salk, MW Schmitt, LA Loeb - PLoS genetics, 2013 - journals.plos.org
Mitochondrial DNA (mtDNA) is believed to be highly vulnerable to age-associated damage
and mutagenesis by reactive oxygen species (ROS). However, somatic mtDNA mutations …